Pairwise Alignments

Query, 126 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 637 a.a., cyclic nucleotide-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 54.3 bits (129), Expect = 3e-12
 Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 17/132 (12%)

Query: 2   KVKELMNPTIFTIDSEKSLFEAFKVMNHKGVKRVF-----VRIDENID-----GVITYRD 51
           KVK+L+  +  TID + S+ +A + M  + V  +      + +D   D     G++T RD
Sbjct: 159 KVKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTERD 218

Query: 52  LAHLFFEKGVFELMDV--TLKDVSTKEILTIDENADVTHAAQMMLHADVSGLLVIDEQKN 109
           L      +G    MDV  T+  V T E++++D NA V  A   ML  +V  L V+ E + 
Sbjct: 219 LCRRVLAQG----MDVTQTVSQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRE-RQ 273

Query: 110 AVGVISQTDILR 121
            +G+I  TDI+R
Sbjct: 274 PIGIIDMTDIVR 285



 Score = 38.1 bits (87), Expect = 2e-07
 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 9/71 (12%)

Query: 63  ELMDVTLKDVSTKEILTIDENADVTHAAQMMLHADVSGLLVIDEQ---------KNAVGV 113
           +L+   +K + T+   TID+ A +  AAQ M   +VS LL++D Q            VG+
Sbjct: 154 DLITSKVKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGI 213

Query: 114 ISQTDILRALV 124
           +++ D+ R ++
Sbjct: 214 VTERDLCRRVL 224