Pairwise Alignments

Query, 126 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 615 a.a., cyclic nucleotide-binding protein (RefSeq) from Shewanella loihica PV-4

 Score = 44.7 bits (104), Expect = 2e-09
 Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 3/120 (2%)

Query: 2   KVKELMNPTIFTIDSEKSLFEAFKVMNHKGVKRVFVRIDENIDGVITYRDLAHLFFEKGV 61
           +V  LM+     +D   S+ +A ++M    V  V +  ++ + G++T RDL +    + +
Sbjct: 151 RVSSLMSKQPLCLDINASVSDAARLMRDNRVSSVLIIDNQKLAGILTDRDLRNRVLAESL 210

Query: 62  FELMDVTLKDVSTKEILTIDENADVTHAAQMMLHADVSGLLVIDEQKNAVGVISQTDILR 121
              + V      T    T+  NA V  A  +M   ++  L ++DE  + +GVI+ TDILR
Sbjct: 211 DGSLPV--HQAMTVTPTTLSANALVFEAMLLMSQHNIHHLPIMDE-GHPIGVITSTDILR 267



 Score = 23.9 bits (50), Expect = 0.004
 Identities = 13/52 (25%), Positives = 26/52 (50%)

Query: 1   MKVKELMNPTIFTIDSEKSLFEAFKVMNHKGVKRVFVRIDENIDGVITYRDL 52
           + V + M  T  T+ +   +FEA  +M+   +  + +  + +  GVIT  D+
Sbjct: 214 LPVHQAMTVTPTTLSANALVFEAMLLMSQHNIHHLPIMDEGHPIGVITSTDI 265