Pairwise Alignments

Query, 126 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 1104 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score = 43.1 bits (100), Expect = 1e-08
 Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 3/114 (2%)

Query: 5   ELMNPTIFTIDSEKSLFEAFKVMNHKGVKRVFVRIDENIDGVITYRDLAHLFFEKGVFEL 64
           +LM   I  ++   +L  A +VM    +  + VR    + G++T RD+        V  L
Sbjct: 8   DLMTWNIVEVERRTTLLAAAEVMETARISSLLVREGALMVGIVTERDILRAL-SANVDGL 66

Query: 65  MDVTLKDVSTKEILTIDENADVTHAAQMMLHADVSGLLVIDEQKNAVGVISQTD 118
           + V    V +  + T D +  V HA  ++    +  LLV  E    VGV+S++D
Sbjct: 67  LAVD--QVMSSPVYTADSHMSVHHAYHLLAEKGIRHLLVTGEAGQPVGVVSESD 118



 Score = 38.1 bits (87), Expect = 3e-07
 Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 12/131 (9%)

Query: 1   MKVKELMNPTIFTIDSEKSLFEAFKVMNHKGVKRVFVRIDENID-GVITYRD----LAHL 55
           + V ++M+  ++T DS  S+  A+ ++  KG++ + V  +     GV++  D    L   
Sbjct: 67  LAVDQVMSSPVYTADSHMSVHHAYHLLAEKGIRHLLVTGEAGQPVGVVSESDFRFHLGAA 126

Query: 56  FFEKGVFELMDVTLKDVSTKEILTIDENADVTHAAQMMLHADVSGLLVIDEQKNAVGVIS 115
           FF +    L DV     S  ++L   +  D    A  ++ A     +V+ E    +G+++
Sbjct: 127 FFRR----LRDVNAVMQSGVQLL---QPGDTVRQALALMSASSLRCVVVAEAGRPLGILT 179

Query: 116 QTDILRALVKG 126
           + D LR   +G
Sbjct: 180 ERDALRFFRRG 190



 Score = 36.6 bits (83), Expect = 1e-06
 Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 68  TLKDVSTKEILTIDENADVTHAAQMMLHADVSGLLVIDEQKNAVGVISQTDILRAL 123
           TL D+ T  I+ ++    +  AA++M  A +S LLV  E    VG++++ DILRAL
Sbjct: 5   TLADLMTWNIVEVERRTTLLAAAEVMETARISSLLV-REGALMVGIVTERDILRAL 59



 Score = 36.2 bits (82), Expect = 1e-06
 Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 2/121 (1%)

Query: 3   VKELMNPTIFTIDSEKSLFEAFKVMNHKGVKRVFVRIDENIDGVITYRDLAHLFFEKGVF 62
           V  +M   +  +    ++ +A  +M+   ++ V V       G++T RD A  FF +G  
Sbjct: 134 VNAVMQSGVQLLQPGDTVRQALALMSASSLRCVVVAEAGRPLGILTERD-ALRFFRRGA- 191

Query: 63  ELMDVTLKDVSTKEILTIDENADVTHAAQMMLHADVSGLLVIDEQKNAVGVISQTDILRA 122
           + ++  L  V +  + +I E   ++ A   M    V  L+V+      VGV+S+ DI+  
Sbjct: 192 DSLEQPLAAVMSAPVASIPEGYPLSQAVDRMQAEHVRHLVVVGAAGEVVGVVSEHDIVSQ 251

Query: 123 L 123
           L
Sbjct: 252 L 252