Pairwise Alignments

Query, 126 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 620 a.a., CBS domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 50.8 bits (120), Expect = 3e-11
 Identities = 32/124 (25%), Positives = 63/124 (50%), Gaps = 6/124 (4%)

Query: 2   KVKELMNPTIFTIDSEKSLFEAFKVMNHKGVKRVFVRIDENIDGVITYRDLAHLFFEKGV 61
           ++  LM+ +  TID+  ++ +A  +M +  V  + V  +  + G++T +DL +     G+
Sbjct: 151 RISTLMSSSPITIDAHATVTQAALLMRNSRVSSLLVTDNHKLVGILTDKDLRNRVLASGL 210

Query: 62  FELMDVTLKDVSTKEILTIDENADVTHAAQMMLHADVSGLLVIDEQK----NAVGVISQT 117
                + +    T   ++I  NA +  A  +M   ++  L +IDEQ      A+G+++ T
Sbjct: 211 DG--QIAVHQAMTTSPISISSNALIFEAMLLMSEHNIHHLPIIDEQNTDEVKAIGMVTST 268

Query: 118 DILR 121
           DILR
Sbjct: 269 DILR 272



 Score = 35.8 bits (81), Expect = 1e-06
 Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 2/50 (4%)

Query: 78  LTIDENADVTHAAQMMLHADVSGLLVIDEQKNAVGVISQTDIL-RALVKG 126
           +TID +A VT AA +M ++ VS LLV D  K  VG+++  D+  R L  G
Sbjct: 161 ITIDAHATVTQAALLMRNSRVSSLLVTDNHK-LVGILTDKDLRNRVLASG 209