Pairwise Alignments

Query, 308 a.a., ribonuclease Z from Methanococcus maripaludis S2

Subject, 330 a.a., Metal-dependent hydrolases of the beta-lactamase superfamily III from Pseudomonas stutzeri RCH2

 Score =  139 bits (350), Expect = 9e-38
 Identities = 94/314 (29%), Positives = 153/314 (48%), Gaps = 12/314 (3%)

Query: 1   MKITFLGTGAAIPTKYRAHPSISLKFDG--EIFLFDCGENTQRQIIFTDVSPMKINNIFI 58
           M + FLGT +  PT+ R   +++L  D     +L DCGE TQ +++ T +S   +  I I
Sbjct: 1   MDLLFLGTSSGTPTRARNVTALALLEDTGKSWYLIDCGEGTQHRLLRTPLSLHDLRAICI 60

Query: 59  THLHGDHVLGLPGLLQSIAFQGRKKPLNIYGPAETVKMIEHILGVGYHSIDYPINVHEIS 118
           TH+HGDH  GLPGLL S    GRK  L I  P      +   L +    + Y ++   + 
Sbjct: 61  THVHGDHCYGLPGLLASAGMMGRKATLTIIAPQGIETWVRTTLDMSQSWLGYELDFRAVE 120

Query: 119 SKTPERIIFTNNYEVFSYPVVHSVPALAYVFKQVK-KPRMDLEKVKKLGIEIGPDLKRLK 177
           S    R   + N  + +  + H VP   Y F + +  PR+D+E++++ G+  GP   +L 
Sbjct: 121 SLDEWR---SPNMRIEATALSHRVPCYGYSFTEARPDPRLDIERLERDGVPRGPLWGQLA 177

Query: 178 DGFNVELNGEIITLNDVTLPPKKGICVGYSGDTIPLKEFAEFLKELKCNTLIHEATFDKT 237
            GF++E  G ++  +D     +    +   GD       A+  +      L+HEAT+ + 
Sbjct: 178 RGFDIEHEGRVLRSDDYLSFSRAPQRIVIGGDNDRPDLLADACR--GAQLLVHEATYTEA 235

Query: 238 MERNAKETL-HSTATDALNIAKLSGVSTVLLTHISARYDNLNAFENEIVEFKAENPEIH- 295
           +  +A+    HSTA      A+  G+  ++LTH SARY       + I + +AE   ++ 
Sbjct: 236 VANDARNDFGHSTAASVARFAQAVGLPNLVLTHFSARYQKHPGRGHSIEDLRAEANVLYS 295

Query: 296 --VLIAEDLMEYSL 307
             +L+AED M   L
Sbjct: 296 GQLLLAEDFMRLHL 309