Pairwise Alignments

Query, 308 a.a., ribonuclease Z from Methanococcus maripaludis S2

Subject, 273 a.a., Conserved hypothetical protein from Mycobacterium tuberculosis H37Rv

 Score = 72.0 bits (175), Expect = 1e-17
 Identities = 71/276 (25%), Positives = 110/276 (39%), Gaps = 51/276 (18%)

Query: 1   MKITFLGTGAAIPTKYRAHPSISLKFDGEIFLFDCGENTQRQIIFTDVSPMKINNIFITH 60
           ++IT LGTG+ IP   RA PS  ++   + FL DCG    ++     V    ++ + +TH
Sbjct: 2   LEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTH 61

Query: 61  LHGDHVLGLPGLLQSIAFQGRKKPLNIYGPAETVKMIEHILGVGYHSIDYPINVHEISSK 120
           LHGD ++          F     PL I GP  T +++E  L    H I Y I  H     
Sbjct: 62  LHGDVLI----TSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRI-AHHADLT 116

Query: 121 TPERIIFTNNYEVFSYPVVHSVPALAYVFKQVKKPRMDLEKVKKLGIEIGPDLKRLKD-- 178
           TP  I      EV  Y                  P  D + V    I + P   R     
Sbjct: 117 TPPPI------EVHEY---------------TAGPAWDRDGVT---IRVAPTDHRPVTPT 152

Query: 179 -GFNVELNGEIITLNDVTLPPKKGICVGYSGDTIPLKEFAEFL--KELKCNTLIHEATFD 235
            GF +E +G  + L               +GDT+P     +     +   +T+I +    
Sbjct: 153 IGFRIESDGASVVL---------------AGDTVPCDSLDQLAAGADALVHTVIRKDIVT 197

Query: 236 KTMERNAKE--TLHSTATDALNIAKLSGVSTVLLTH 269
           +  ++  K+    HS+  +A   A  +GV T+++TH
Sbjct: 198 QIPQQRVKDICDYHSSVQEAAATANRAGVGTLVMTH 233