Pairwise Alignments

Query, 308 a.a., ribonuclease Z from Methanococcus maripaludis S2

Subject, 308 a.a., ribonuclease Z from Methanococcus maripaludis JJ

 Score =  587 bits (1514), Expect = e-173
 Identities = 291/308 (94%), Positives = 301/308 (97%)

Query: 1   MKITFLGTGAAIPTKYRAHPSISLKFDGEIFLFDCGENTQRQIIFTDVSPMKINNIFITH 60
           MKITFLGTGAAIPTKYRAHPSISLKFDGEIFLFDCGENTQRQIIFTDVSPMKINNIFITH
Sbjct: 1   MKITFLGTGAAIPTKYRAHPSISLKFDGEIFLFDCGENTQRQIIFTDVSPMKINNIFITH 60

Query: 61  LHGDHVLGLPGLLQSIAFQGRKKPLNIYGPAETVKMIEHILGVGYHSIDYPINVHEISSK 120
           LHGDHVLGLPGLLQSIAFQGRKK LNIYGP+ET KMIEHI+GVGYHSIDYPINV+EISSK
Sbjct: 61  LHGDHVLGLPGLLQSIAFQGRKKTLNIYGPSETAKMIEHIMGVGYHSIDYPINVYEISSK 120

Query: 121 TPERIIFTNNYEVFSYPVVHSVPALAYVFKQVKKPRMDLEKVKKLGIEIGPDLKRLKDGF 180
           TPE+II TNNYEVFSYPVVHSVPALAYVFKQVKKPRMDLEKVKKLGIEIGPDLKRLKDGF
Sbjct: 121 TPEKIISTNNYEVFSYPVVHSVPALAYVFKQVKKPRMDLEKVKKLGIEIGPDLKRLKDGF 180

Query: 181 NVELNGEIITLNDVTLPPKKGICVGYSGDTIPLKEFAEFLKELKCNTLIHEATFDKTMER 240
           NVELNG+IIT  DV+LPPKKGICVGYSGDTIPL EFAEFLKELKCNTLIHEATFDKTMER
Sbjct: 181 NVELNGKIITPEDVSLPPKKGICVGYSGDTIPLNEFAEFLKELKCNTLIHEATFDKTMER 240

Query: 241 NAKETLHSTATDALNIAKLSGVSTVLLTHISARYDNLNAFENEIVEFKAENPEIHVLIAE 300
           NAKETLHSTATDALNIAKLSGVSTVLLTHISARYDN++AFE+EIVEFK+ENPEIHVLIAE
Sbjct: 241 NAKETLHSTATDALNIAKLSGVSTVLLTHISARYDNIDAFESEIVEFKSENPEIHVLIAE 300

Query: 301 DLMEYSLK 308
           DLMEY LK
Sbjct: 301 DLMEYPLK 308