Pairwise Alignments

Query, 308 a.a., ribonuclease Z from Methanococcus maripaludis S2

Subject, 323 a.a., ribonuclease Z from Marinobacter adhaerens HP15

 Score =  134 bits (336), Expect = 4e-36
 Identities = 103/316 (32%), Positives = 159/316 (50%), Gaps = 14/316 (4%)

Query: 1   MKITFLGTGAAIPTKYRAHPSISLKFDG--EIFLFDCGENTQRQIIFTDVSPMKINNIFI 58
           M+ TFLGT A  PTK R    ++L   G    +L DCGE TQ Q++ T  S M++  IFI
Sbjct: 1   MEFTFLGTSAGTPTKSRNVTGLALSHGGPKHWYLIDCGEGTQHQLLRTHHSVMQLQAIFI 60

Query: 59  THLHGDHVLGLPGLLQSIAFQGRKKPLNIYGPAETVKMIEHILGVGYHSIDYPINVHEIS 118
           TH+HGDH  GLPGLL S +  GR  PL +  P      IE  +G    S+ + +   +  
Sbjct: 61  THIHGDHTFGLPGLLTSASMLGRTAPLYLVAPRPVKTFIEAAIGNSDSSLSFELRFFD-- 118

Query: 119 SKTPERIIFTNNYEVFSYPVVHSVPALAYVFKQVKKPR-MDLEKVKKLGIEIGPDLKRLK 177
           S+        ++  V + P+ H V   A+VF +    R +  ++++  GIE GP   RL+
Sbjct: 119 SEAENFHWEDDSLSVTAVPLSHRVSCRAFVFTEKNLERQLVRDRLEADGIEAGPAWGRLQ 178

Query: 178 DGFNVEL-NGEIITLNDVTLPPKKGICVGYSGDTIPLKEFAEFLKELKCNTLIHEATF-D 235
            G +V L +G +   +D T   +K   V  +GD             ++   +IHEAT+  
Sbjct: 179 QGDDVVLEDGRLARCDDYTRIARKPRKVIVAGDNDQPDLLLAACTGVQ--VVIHEATYTQ 236

Query: 236 KTMERNAKETLHSTATDALNIAKLSGVSTVLLTHISARYD-NLNAFENEIVEFKAENPEI 294
           +  +R      HS+A      A+ +GV  ++LTH S+RY  N +A+ + I E ++E   I
Sbjct: 237 EVSDRVGPWPQHSSAAQVARFAEAAGVPNLVLTHFSSRYQFNPDAYPH-IGEIESEAKGI 295

Query: 295 H---VLIAEDLMEYSL 307
           +   + +A+D   Y L
Sbjct: 296 YRGNLYLAKDFACYEL 311