Pairwise Alignments

Query, 308 a.a., ribonuclease Z from Methanococcus maripaludis S2

Subject, 316 a.a., conserved hypothetical protein, with a Metallo-beta-lactamase superfamily domain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  145 bits (366), Expect = 1e-39
 Identities = 90/286 (31%), Positives = 149/286 (52%), Gaps = 9/286 (3%)

Query: 2   KITFLGTGAAIPTKYRAHPSISLKFDGEIFLFDCGENTQRQIIFTDVSPMKINNIFITHL 61
           ++  LG G+A+PT      S  +    ++F+ DCGE  Q Q+  + +   ++N+IFI+HL
Sbjct: 5   ELHILGCGSALPTTRHFATSQVVNLREKLFMIDCGEGAQMQLRRSRLKFSRLNHIFISHL 64

Query: 62  HGDHVLGLPGLLQSIAFQGRKKPLNIYGPAETVKMIEHILGVGYHSIDYPINVHEISSKT 121
           HGDH  GL GL+ +    GR   L+I+ P    ++   +L     ++ Y +  HE  +K 
Sbjct: 65  HGDHCFGLLGLISTFGLLGRTADLHIHSPKGLEELFAPLLSFFCKTLAYKVFFHEFETKE 124

Query: 122 PERIIFTNNYEVFSYPVVHSVPALAYVFKQVKKPR---MDLEKVKKLGIEIGPDLKRLKD 178
           P  I    +  V + P+ H +P   ++F++ ++P     D+    K+ +    +L R+K+
Sbjct: 125 PTLIYDDRSVAVTTIPLRHRIPCCGFLFEEKQRPNHIIRDMVDFYKVPVY---ELNRIKN 181

Query: 179 GFN-VELNGEIITLNDVTLPPKKGICVGYSGDTIPLKEFAEFLKELKCNTLIHEATFDKT 237
           G + V   GE+I  + +T P        Y  DTI   E  E +K +  + L HEATF +T
Sbjct: 182 GADFVTPEGEVIPNHRLTRPSAPARKYAYCSDTIYRPEIVEQIKGI--DLLFHEATFAQT 239

Query: 238 MERNAKETLHSTATDALNIAKLSGVSTVLLTHISARYDNLNAFENE 283
            +  AKET H+TA  A  IA  + V  +++ H SARY++ +   NE
Sbjct: 240 EQVRAKETHHTTAAQAAQIALNAEVKQLVIGHFSARYEDESVLLNE 285