Pairwise Alignments

Query, 345 a.a., NOG1 family protein from Methanococcus maripaludis S2

Subject, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

 Score = 48.9 bits (115), Expect = 3e-10
 Identities = 43/169 (25%), Positives = 82/169 (48%), Gaps = 9/169 (5%)

Query: 173 LPSVVIAGYPNVGKSTLLRTLT-DAEPEVNSYPFTTKGLNIGYTEEG---IQIIDTPGVL 228
           +P V + G PNVGKSTL   LT   +  V  +P  T+    G  + G     +IDT G+ 
Sbjct: 2   VPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGID 61

Query: 229 DRPIYERNDIELHAVVAINYLSDMILFVIDPTEFCGFTMEEQFNLLQEIRKTFNVPILVA 288
                    +   ++ AI+  +D++LF++D     G T+ ++  + Q +R+    P ++ 
Sbjct: 62  GSEEGVETKMAQQSLAAIDE-ADVVLFMVDGR--AGLTVADE-AIAQHLRR-IEKPAILV 116

Query: 289 LTKMDVDEIEGLDKLEEDLGEYEVLKVSSFKKEGIADLRERLLDILDEQ 337
           + K+D  + +        LG  ++ ++++    G+  L +R+L+   EQ
Sbjct: 117 VNKVDGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVLNPFAEQ 165



 Score = 33.9 bits (76), Expect = 9e-06
 Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 7/99 (7%)

Query: 170 VKNLP-SVVIAGYPNVGKSTLL-RTLTDAEPEVNSYPFTTKG---LNIGYTEEGIQIIDT 224
           +++LP  + I G PNVGKSTL  R L +    V   P TT+    + +   E    +IDT
Sbjct: 201 LQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDT 260

Query: 225 PGVLDRPIYERNDIELHAVVAINYLSD--MILFVIDPTE 261
            GV  R        +   V  +  + D  ++L V+D  E
Sbjct: 261 AGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVDARE 299