Pairwise Alignments
Query, 1026 a.a., SBBP repeat-containing protein from Methanococcus maripaludis S2
Subject, 1028 a.a., right-handed parallel beta-helix repeat-containing protein from Methanococcus maripaludis JJ
Score = 233 bits (595), Expect = 4e-65
Identities = 268/1022 (26%), Positives = 429/1022 (41%), Gaps = 154/1022 (15%)
Query: 70 NSTLDFGATSEVGYSIALDNGGNAYVTGR----GNDNFVTIKY---APNGTILWNTSLHM 122
+ST++ GYSI L++ A ++G N + I NGTI NT
Sbjct: 93 DSTIENSEIITEGYSIKLEDSYGATISGNDITVANGEYYGIYVDGNLENGTIFGNTINVT 152
Query: 123 GHYEYPESIAVDLDGNSYVTGYMNNDTTN-NRNLVIV---KYAPNGTILWNSAFSYNSND 178
+ V NS ++G N T N +RN + +Y + TI N
Sbjct: 153 NNNNVCGIYTVSNITNSVISG--NTITVNTDRNAYAICADEYIVDSTIENN--------- 201
Query: 179 CLGMVIALDDSGNAYVTGSAYISFGRSTILTTKYAPNGTMEWYKLFDG-------GSSLG 231
VI L + Y ++ + TT N T E Y G S +
Sbjct: 202 ----VIDLVAGDDGYTEALGISAYDEDILNTTISGNNITAEAYWWACGIDAYYVMYSEIE 257
Query: 232 SGCGLALDDSGNAYVTGFRTGTDYDMVTAKYAPNGTLL----WSSTLNQLGNDIGYGLAL 287
+ + + GN V DY++ + N W+ ++ DI
Sbjct: 258 NNV-INVTARGNDEVYADGIYADYNITNNVISGNNITAYSNDWACGIDAYSGDIVDSTIE 316
Query: 288 DDSGNAYVTGYVTNGTENMITLKYAPNGTILWNNTIDYGSDRDYGFDVVLDNGGNAYFTG 347
D+ + YV Y G I Y N T + NT+ + + DN
Sbjct: 317 DNVIDVYVYDYYNYGEAFGIYAYYNINNTEILRNTLTANASYEAYGICTSDND------- 369
Query: 348 YVTDESRGQNIIAMKYAPNGTNLWNSTYCPGINSWGNAIEVDNSGNAYVTGSMSGYAIVT 407
+ D + N+I + NG + + Y ++ AI D+ Y+ S+ I+T
Sbjct: 370 -IVDSTIEDNVIDL--IANGEYFYENLY-----AYTYAICADD----YINNSVISRNIIT 417
Query: 408 VKFGIPVDETAPEVTINTLEKSYNTTSIVINVTATDLNLDS-VIAEINGTENITLENISG 466
+ D I ++S ++I NV DS I I E +ISG
Sbjct: 418 AESCYETDG------IEAYDESIIDSTIEDNVIDLIATGDSNYIYAIYADEYTINSSISG 471
Query: 467 NFVNSTYEFSEGLNTLKIYANDTSGNVNSSENISFIVDVTNPE---------LRIETSNV 517
N + T S+ + +Y T N S+N I+ ++ E ETS +
Sbjct: 472 NTI--TANASDEAFGVYLYYYVT--NTTISDNQVTIISESDSEDEAYGIYLYYGAETSII 527
Query: 518 SNTSELTINVTATDNIELNYTNFSIVDNFGNLVNSTVNETNGSYQITLSVPADGIYNVTA 577
S+ S +T NY++ D++G+++N T+++ T++ + Y ++
Sbjct: 528 SSNSVITYG---------NYSHGIEFDDYGDIINVTISDN------TITTYGEDAYGISI 572
Query: 578 TAFDMVGNTNTTEAINVTVDENAPLVTINTLEKSYNTTSIVIN----VTATDLNLDSVIA 633
+DM + T +N +++ + T + S + + + +L D
Sbjct: 573 E-YDMYDSIITGNTVNTFGNDSYGIYTYYDIYDSKISDNTITTYGDYAYGIELYDDDYYN 631
Query: 634 EINGTENITLENISGYFVNSTYEFSEG---SNTVKIYANDSFGHINSNENITFRVDLNSP 690
+T Y ++ Y+ + NTV + NDS+G I + +
Sbjct: 632 VTLAQNTVTTYGEDAYGISIEYDMYDSIITGNTVNTFGNDSYG-------IYTYYSVTNT 684
Query: 691 EITINLIEGEYLNNGSNVINFTVNESNLDKVTAFNGSTEIALENSTGNYLNSVALNEGVY 750
I+ N + E GS + + L T + + A + G Y+ A N +
Sbjct: 685 TISSNTVTTE----GSWAYGIYIYDDPLIDSTISDNAVTTAGYEAYGIYIEYGAENSNIS 740
Query: 751 NVTIRINDTAGNIAEKSLNFIIDTTAPVLTLNNPVNGTTFTTSSVSLNVSANDS----LS 806
T+ N + ++ D T + N TFT+ ++ +++++ L+
Sbjct: 741 GNTVITNGE-----DTYALYLYDVTTSSIFEN------TFTSGDYAIYINSSEENRFYLN 789
Query: 807 NVSSVTAK-----IGSVRNVTLFFDGNYYTGNTGTLSNGNYEIRIIATDLVGN--VNSNE 859
N+ + S +T ++G YT G NY + +D G+ +++
Sbjct: 790 NIDGLLNNGTDNYFVSSETITYSYNGKSYTSILG-----NYWVGYDESDTNGDGIIDTPY 844
Query: 860 TVNITIK----------------VPASTSSGSSGSHYSSDLSDGITSSVIKNTVSNSNIV 903
T+N T V S SSG SG Y SD+SD I S VIKN VS++ ++
Sbjct: 845 TLNGTNDTKPLADMWNDGEIGNYVAPSRSSGGSGRSYDSDISDEIESKVIKNFVSSATVL 904
Query: 904 YGSEIDGKYAGKLKENLYNSEDYEISGDTIIVGGPKYNVLANKYDSKFGISISNDYPGEN 963
+G+ ID +YA +L+E + ++ Y ISG+ +IVGGP N A +Y+ +F + ISNDYPGEN
Sbjct: 905 FGNGIDEQYAVQLRERVTDANGYTISGNAVIVGGPNANGFAKEYNDQFEMPISNDYPGEN 964
Query: 964 NGIIQVLKVQDNTGNIIKSYKIVYIAGSDRLGTQAALEYFKTLNELPEGPIMVEWTENGP 1023
GIIQV+ +QDN+G II+SY IVYIAGSDRLGTQAALEYFKTL+ELPEGPIM+EWT NGP
Sbjct: 965 RGIIQVMDIQDNSGTIIRSYTIVYIAGSDRLGTQAALEYFKTLDELPEGPIMIEWTANGP 1024
Query: 1024 VL 1025
V+
Sbjct: 1025 VV 1026
Score = 52.4 bits (124), Expect = 2e-10
Identities = 132/650 (20%), Positives = 238/650 (36%), Gaps = 159/650 (24%)
Query: 444 LNLDSVIAEINGTENITLENISGNFVNSTYEFSEGLNTLKIYANDTSGNVNSSENISFIV 503
L+ +S++ IN TEN+TL+ +F +T +++ +YA ++S V + N ++
Sbjct: 29 LDSNSIVFLINNTENVTLDCNEMSFTTNTTN-----SSILVYAYNSSNIVVKNMNANWSK 83
Query: 504 D-----------VTNPELRIETSNVSNTSELTINVTATDNIELNYTNFSI-VDN------ 545
D + N E+ E ++ ++ D N + I VD
Sbjct: 84 DTIIFENVNDSTIENSEIITEGYSIKLEDSYGATISGNDITVANGEYYGIYVDGNLENGT 143
Query: 546 -FGNLVNST-VNETNGSYQI-----------TLSVPAD-GIYNVTATAF----------- 580
FGN +N T N G Y + T++V D Y + A +
Sbjct: 144 IFGNTINVTNNNNVCGIYTVSNITNSVISGNTITVNTDRNAYAICADEYIVDSTIENNVI 203
Query: 581 DMV-GNTNTTEAINVTV-DENAPLVTI---NTLEKSY--------------NTTSIVINV 621
D+V G+ TEA+ ++ DE+ TI N ++Y + VINV
Sbjct: 204 DLVAGDDGYTEALGISAYDEDILNTTISGNNITAEAYWWACGIDAYYVMYSEIENNVINV 263
Query: 622 TA---TDLNLDSVIAEINGTENIT---------------LENISGYFVNSTYEFSEGSNT 663
TA ++ D + A+ N T N+ ++ SG V+ST E N
Sbjct: 264 TARGNDEVYADGIYADYNITNNVISGNNITAYSNDWACGIDAYSGDIVDSTIE----DNV 319
Query: 664 VKIYANDSFGHINSNENITFRVDLNSPEITINLIEGE-------YLNNGSNVINFTVNES 716
+ +Y D + + I ++N+ EI N + + +++++ T+ ++
Sbjct: 320 IDVYVYDYYNY-GEAFGIYAYYNINNTEILRNTLTANASYEAYGICTSDNDIVDSTIEDN 378
Query: 717 NLDKVTAFNGSTEIALEN--------STGNYLNS-------------------VALNEGV 749
+D + NG E EN +Y+N+ A +E +
Sbjct: 379 VIDLIA--NG--EYFYENLYAYTYAICADDYINNSVISRNIITAESCYETDGIEAYDESI 434
Query: 750 YNVTIRINDTAGNIAEKSLNFIIDTTAPVLTLNNPVNGTTFTTSSVS-----------LN 798
+ TI N IA N+I A T+N+ ++G T T ++ N
Sbjct: 435 IDSTIEDN-VIDLIATGDSNYIYAIYADEYTINSSISGNTITANASDEAFGVYLYYYVTN 493
Query: 799 VSANDSLSNVSSVTAKIGSVRNVTLFFDG-NYYTGNTGTLSNGNYEIRIIATDLVGNVNS 857
+ +D+ + S + + L++ + ++ GNY I D
Sbjct: 494 TTISDNQVTIISESDSEDEAYGIYLYYGAETSIISSNSVITYGNYSHGIEFDDY------ 547
Query: 858 NETVNITIKVPASTSSGSS--GSHYSSDLSDGITSSVIKNTVSNSNI-------VYGSEI 908
+ +N+TI T+ G G D+ D I + NT N + +Y S+I
Sbjct: 548 GDIINVTISDNTITTYGEDAYGISIEYDMYDSIITGNTVNTFGNDSYGIYTYYDIYDSKI 607
Query: 909 DGKYAGKLKENLYNSEDYEISGDTIIVGGPKYNVLANKYDSKFGISISND 958
+ Y E Y+ + + N + + +GISI D
Sbjct: 608 SDNTITTYGDYAYGIELYDDDYYNVTLA---QNTVTTYGEDAYGISIEYD 654
Score = 40.4 bits (93), Expect = 7e-07
Identities = 51/237 (21%), Positives = 96/237 (40%), Gaps = 29/237 (12%)
Query: 540 FSIVDNFGNLVNSTVNETNGSYQITLSVPADGIYNVTATAFDMVGNTNTTEAINVTVDEN 599
F ++D G +T N ++ + NVT +M TNTT + + N
Sbjct: 9 FIVIDKPGEYTVTTGFANNSLDSNSIVFLINNTENVTLDCNEMSFTTNTTNSSILVYAYN 68
Query: 600 APLVTINTLEKSYNTTSIVI-NVTATDLNLDSVIAE-------------INGTENITLEN 645
+ + + + +++ +I+ NV + + +I E I+G + IT+ N
Sbjct: 69 SSNIVVKNMNANWSKDTIIFENVNDSTIENSEIITEGYSIKLEDSYGATISGND-ITVAN 127
Query: 646 ISGYFVNSTYEFSEGS---NTVKIYANDSFGHINSNENITFRVDLNSPEITINLIEGEY- 701
Y + G+ NT+ + N++ I + NIT V ++ IT+N Y
Sbjct: 128 GEYYGIYVDGNLENGTIFGNTINVTNNNNVCGIYTVSNITNSV-ISGNTITVNTDRNAYA 186
Query: 702 LNNGSNVINFTVNESNLDKVTAFNGSTEIALENSTGNYLNSVALNEGVYNVTIRIND 758
+ +++ T+ + +D V +G TE L A +E + N TI N+
Sbjct: 187 ICADEYIVDSTIENNVIDLVAGDDGYTEA---------LGISAYDEDILNTTISGNN 234
Score = 31.2 bits (69), Expect = 4e-04
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 29/203 (14%)
Query: 748 GVYNVTIRINDTAGNIAEKSLNFIIDTTAPVLTLNNPVNGTTFTTSSVSLNVSANDSLSN 807
G Y VT + + + S+ F+I+ T V N ++ TT TT+S L + N S
Sbjct: 16 GEYTVTTGFANNS--LDSNSIVFLINNTENVTLDCNEMSFTTNTTNSSILVYAYNSSNIV 73
Query: 808 VSSVTAKIGSVRNVTLFFDGNYYTGNTGTLSNGNYEIRIIATDLVGNVNSNETVNITIKV 867
V ++ A ++ +F + N T + Y I++ D G S + +
Sbjct: 74 VKNMNANWS--KDTIIFENVNDSTIENSEIITEGYSIKL--EDSYGATISGNDITV---- 125
Query: 868 PASTSSGSSGSHYSSDLSDGI-TSSVIKNTVSNSNIVYGSEIDGKYAGKLKENLYNSEDY 926
++G +Y + + ++ NT+ N+ + + G Y N+ NS
Sbjct: 126 -------ANGEYYGIYVDGNLENGTIFGNTI---NVTNNNNVCGIYT---VSNITNS--- 169
Query: 927 EISGDTIIVGGPK--YNVLANKY 947
ISG+TI V + Y + A++Y
Sbjct: 170 VISGNTITVNTDRNAYAICADEY 192