Pairwise Alignments

Query, 1026 a.a., SBBP repeat-containing protein from Methanococcus maripaludis S2

Subject, 446 a.a., S-layer protein from Methanococcus maripaludis JJ

 Score = 65.9 bits (159), Expect = 6e-15
 Identities = 98/438 (22%), Positives = 173/438 (39%), Gaps = 86/438 (19%)

Query: 601  PLVTINT-----------LEKSYNTTSIVINVTATDLNLDSVIAEINGTENITLENISGY 649
            PL+ +N+           ++K Y   +I +N     +  +++I  +   +   + +  G 
Sbjct: 30   PLIVVNSEKVDKSYAELLMDKYYTKRTIEVNSDNEIVVNENIIYNVPAIDEFEINDGKG- 88

Query: 650  FVNSTYEFSEGSNTVKIYANDSFGHINSNEN---ITFRVDLNSPEITINLIEGEYLNNGS 706
              N   EF++   TV     +    I S++    +TF         T  ++E E   +G 
Sbjct: 89   --NLLVEFTKSGETVTYKNFEYEEEIESDDEGDEVTFMGK------TYRVLEYE---SGK 137

Query: 707  NVINFTVNESNLDKVTAFNGST-EIALENSTGNYLNSVAL-NEGVYNVTIRINDTAGNIA 764
             V+  T+ +        + G T ++   NS G  + SV   N+ V N+ +  +D+   I+
Sbjct: 138  IVLGNTIEDFETSDEFNYEGYTIKVVASNSDGEIMVSVYKGNDRVDNLKMYPDDSC-MIS 196

Query: 765  EKSLNFIIDTTAPVLTLNNPVNGTTFTTSSVSLNVSANDSLSNVSSVTAKIGSVRNVTLF 824
              SL+   D       L +      F   S SL +   +S  +      +I   + +TL 
Sbjct: 197  GSSLSLYYDEY-----LTSGDTPYFFFELSDSLELEDGESFEDNGEFDVEIDG-KKITLD 250

Query: 825  FDGNYYTGNTGTLSNGNYEIRIIATDLVGNVNSNETVNITIKVPASTSSGSSGSHYSSDL 884
            +D          L N N E+    TD+     S+E + +   V  + S       Y  D+
Sbjct: 251  YDSPKSLSKNFELLNYNVEL----TDV-----SSEDLTVFFTVTQTES-------YEYDM 294

Query: 885  SDGITSSVIKNTVSNSNIVYGSEIDGKYAGKLKENLY---NSEDYE-------------- 927
             +G        T    N ++  ++D        + LY   N++ Y+              
Sbjct: 295  DEG--------TKYFGNNIFAVKLDNDEENDWDDELYLYKNNKKYDKIVDYQGSVQLVDQ 346

Query: 928  -----ISGDTIIVGGPKYNVLANKYDSKFGISISNDYPGENNGIIQVLKVQDNTGNIIKS 982
                  S D I++GGP  N +     +   + ++NDYPGE  G+IQ +    N GN    
Sbjct: 347  DELLSASSDLILIGGPVSNKVTESIQNSLSVEVTNDYPGEGKGVIQTI-TNPNNGN---- 401

Query: 983  YKIVYIAGSDRLGTQAAL 1000
             KI+ +AGSDR GT+A +
Sbjct: 402  SKILVLAGSDRDGTKACV 419



 Score = 34.7 bits (78), Expect = 1e-05
 Identities = 37/157 (23%), Positives = 63/157 (40%), Gaps = 11/157 (7%)

Query: 389 DNSGNAYVTGSMSGYAIVTVKFG----IPVDETAPEVTI-----NTLEKSYNTTSIVINV 439
           D  GN  V  + SG  +    F     I  D+   EVT        LE  Y +  IV+  
Sbjct: 85  DGKGNLLVEFTKSGETVTYKNFEYEEEIESDDEGDEVTFMGKTYRVLE--YESGKIVLGN 142

Query: 440 TATDLNLDSVIAEINGTENITLENISGNFVNSTYEFSEGLNTLKIYANDTSGNVNSSENI 499
           T  D            T  +   N  G  + S Y+ ++ ++ LK+Y +D+     SS ++
Sbjct: 143 TIEDFETSDEFNYEGYTIKVVASNSDGEIMVSVYKGNDRVDNLKMYPDDSCMISGSSLSL 202

Query: 500 SFIVDVTNPELRIETSNVSNTSELTINVTATDNIELN 536
            +   +T+ +       +S++ EL    +  DN E +
Sbjct: 203 YYDEYLTSGDTPYFFFELSDSLELEDGESFEDNGEFD 239