Pairwise Alignments
Query, 1026 a.a., SBBP repeat-containing protein from Methanococcus maripaludis S2
Subject, 925 a.a., right-handed parallel beta-helix repeat-containing protein from Methanococcus maripaludis JJ
Score = 126 bits (317), Expect = 6e-33
Identities = 213/891 (23%), Positives = 353/891 (39%), Gaps = 130/891 (14%)
Query: 38 DIAVDEDGNSYVTGGKYDIVTIKYAPNGTRLWNSTLDFGATSEVGYSIALDNGGNAYVTG 97
+I +D GN G Y+ I + N L N G S Y I L+N N ++
Sbjct: 78 NIIIDLKGNKL--SGNYEGRGISISGNNVSLKN-----GIVSNFDYGIVLENAENCKISN 130
Query: 98 R---GND-NFVTIKYAPNGTILWNTSLHMGHYEYPESIAVDLDGNSYVTGYMNNDTTNNR 153
GN + + I + N I N G S + LDG+ + N N
Sbjct: 131 NEVFGNTYDGIYILNSKNNDISENLVYENGVIGIVTS-GIFLDGSEFNNITKNTVNNNIY 189
Query: 154 NLVIVKYAPNGTILWNSAFSYNSNDCLGMVIALDDSGNAYVTGSAYISFGRSTILTTKYA 213
N + + + N I N+ F N V D N+ + Y + + T+ +
Sbjct: 190 NGIELLNSKNNLISGNTVFENEDNG----VFVWDSKNNSIIFNELYQNENNGIL--TRES 243
Query: 214 PNGTMEWYKLFDGGSSLGSGCGLALDDSGNAYVTGFRTGTDYDMVTAKYAPNGTLLWSST 273
+E +F+ DDSG F + ++ G +LW+S
Sbjct: 244 EFNNIESNNIFEN------------DDSGIYSWKSFENTISKNKISKN--SEGIILWNSD 289
Query: 274 LN-----QLGNDIGYGLALDDSGNAYVTGYVTNGTENMITLKYAPNGTILWNNTIDYGSD 328
LN +L N++ G+ ++ G Y T Y N N + +++ +G WN I S+
Sbjct: 290 LNVLFKNRLLNNVKSGIFME-FGTKYNTIY-DNLFNNSLNVRFEDSGENYWNAPIINESN 347
Query: 329 RDYGFDVVLDN---GGNAYFTGYVTDESRGQNIIAMKYAPNGTNLWNSTYCPGINSWGNA 385
+L+ GN ++T E G + AM NG L + Y N+
Sbjct: 348 -------ILEGEFTAGNVWYT----PEGTGFSQKAMNQDSNGDTLSETYYEL------NS 390
Query: 386 IEVDNSGNAYVTGSMSGYAIVTVKFGIPV--DETAPEVTI-NTLEKSY--NTTSIVINVT 440
+DN IP+ D P V+I + E ++ +I+++V+
Sbjct: 391 ENIDN---------------------IPLAPDSVPPVVSIVSPRENAFFGENETILVDVS 429
Query: 441 ATDLN-LDSVIAEINGTENITLENISGNFVNSTYEFSEGLNTLKIYANDTSGNVNSSENI 499
TD + + SV+ E++ + + + S G +T+KIYA D GNVNS E+
Sbjct: 430 VTDNSEIHSVMLEVDNSYKEIMVQNGTTYSKSLDNLDYGAHTIKIYAKDAVGNVNSFESR 489
Query: 500 SFIV---DVTNPELRI---ETSNVSNTSELTINVTATDNIELNYTNFSIVDNFGNLVNST 553
F + D T PE++I + + + SE++I V TD ++ Y+ ++ +D++ T
Sbjct: 490 VFSISTPDSTPPEVKIISPVSKSYAEGSEVSIKVKITDESDI-YSAYAKIDDY------T 542
Query: 554 VN--ETNGSYQITLSVPADGIYNVTATAFDMVGNTNTTEAINVTVDEN---APLVTINTL 608
V+ E+NG Y L G + + D GN+N E + V+E P V I
Sbjct: 543 VDLIESNGYYINILDNLEWGAHTLWIIVTDAAGNSNYNEKVTFDVNEGDITPPEVEIIEP 602
Query: 609 EKSYN-TTSIVINVTATD-LNLDSVIAEINGTENITLENISGYFVNSTYEFSEGSNTVKI 666
E + ++ + V+ATD +DSV ++ + TL S Y+ + + S G +T+++
Sbjct: 603 EIGDSFEENVSVKVSATDDSGIDSVKVMLDEKVSFTLTKSSNYYTGTLTDLSYGIHTLRV 662
Query: 667 YANDSFGHINSNENITFRVDL----NSPEITINLIEGEYLNNGSNVINFTVNESNLDKVT 722
YA D+ +INS+E I F +D+ + IT + E +N N T + ++T
Sbjct: 663 YAEDNEENINSDEVIQFEIDVPDYSYTKPITDDTQEPAETSNPENKTTDTPLNNETGEIT 722
Query: 723 AFNGSTEI--ALENSTGNYLNSVALNEGVYNVTIRINDTAGNIAEKSLNFIIDTTAPVLT 780
E +EN+T N NE N + GNI++ D+
Sbjct: 723 PNESENESNGEIENNTDESQN----NETQNNTDA---EDEGNISDNPSE--NDSPLEPED 773
Query: 781 LNNPVNGTTFTTSSVSLNVSANDSLSNVSSVTAKIGSVRNVTLFFDGNYYTGNTGTLSNG 840
+ +G T T + + A DS N S G + T D TG
Sbjct: 774 SGSADSGDTSDTEPDNNDEGAEDSGDNPSETGEATGDESSETSPDDETQSNDETGESETS 833
Query: 841 NYEIRIIATDLVGNVNSNETVNITIKVPASTSSGSSGSHYSSDLSDGITSS 891
+ E + +ET +IT + TSSG + S D G + S
Sbjct: 834 DDE---------QSETPSETEDITGDESSETSSGDNSDTTSDDNPGGESES 875
Score = 33.5 bits (75), Expect = 7e-05
Identities = 57/249 (22%), Positives = 104/249 (41%), Gaps = 38/249 (15%)
Query: 725 NGSTEIALENSTGNYLNSVALNEGVYNVTIRINDTAGNIAEKSLNFIIDTTAPVLTLNNP 784
N S + A+EN N G+ VT + + G KS N IID L+ N
Sbjct: 44 NNSIQDAIENVPEN---------GIVEVTTDLKVSNGIEINKS-NIIIDLKGNKLSGNYE 93
Query: 785 VNGTTFTTSSVSLNVSANDSLSN----VSSVTAKIGSVRNVTLFFDGNYYTGN--TGTLS 838
G + + ++VSL N +SN + A+ + N +F GN Y G + +
Sbjct: 94 GRGISISGNNVSLK---NGIVSNFDYGIVLENAENCKISNNEVF--GNTYDGIYILNSKN 148
Query: 839 NGNYEIRIIATDLVGNVNSNETVNITIKVPASTSSGSSGSHYSSDLSDGITSSVIKNTVS 898
N E + ++G V S I + S + + + ++++ +GI KN +
Sbjct: 149 NDISENLVYENGVIGIVTSG------IFLDGSEFNNITKNTVNNNIYNGIELLNSKNNLI 202
Query: 899 NSNIVYGSEIDGKYAGKLKEN-LYNSEDYEISGDTIIVGGPKYNVLANKYDSKFGISISN 957
+ N V+ +E +G + K N + +E Y+ + I+ ++N I +N
Sbjct: 203 SGNTVFENEDNGVFVWDSKNNSIIFNELYQNENNGILTRESEFN----------NIESNN 252
Query: 958 DYPGENNGI 966
+ +++GI
Sbjct: 253 IFENDDSGI 261
Score = 26.6 bits (57), Expect = 0.009
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 14/136 (10%)
Query: 847 IATDLVGNVNSNETVNITIKVPASTSSGSSGSHYSSDLSDGITSSVIKNTVSNSNIVYGS 906
I DL GN S I + + S +G S+ GI +N ++N V+G+
Sbjct: 79 IIIDLKGNKLSGNYEGRGISISGNNVSLKNG--IVSNFDYGIVLENAENCKISNNEVFGN 136
Query: 907 EIDGKYAGKLKENLYNSEDYEISGDTIIVGGPKYNVLANKY--DSKFGISISNDYPGENN 964
DG Y + NS++ +IS + + G V + + S+F N NN
Sbjct: 137 TYDGIY-------ILNSKNNDISENLVYENGVIGIVTSGIFLDGSEFNNITKNTV---NN 186
Query: 965 GIIQVLKVQDNTGNII 980
I +++ ++ N+I
Sbjct: 187 NIYNGIELLNSKNNLI 202