Pairwise Alignments

Query, 1026 a.a., SBBP repeat-containing protein from Methanococcus maripaludis S2

Subject, 416 a.a., right-handed parallel beta-helix repeat-containing protein from Methanococcus maripaludis JJ

 Score =  213 bits (541), Expect = 3e-59
 Identities = 107/180 (59%), Positives = 136/180 (75%), Gaps = 4/180 (2%)

Query: 847  IATDLVGNVNSNETVNIT---IKVPASTSSGSSGSH-YSSDLSDGITSSVIKNTVSNSNI 902
            +  D+    N  E   IT   +    + SSGSSG   Y SD+SD I S VIKN VS++ +
Sbjct: 232  LIADIFALTNDPENYVITDAPVTTTTTRSSGSSGGRSYDSDISDEIDSKVIKNFVSSAAV 291

Query: 903  VYGSEIDGKYAGKLKENLYNSEDYEISGDTIIVGGPKYNVLANKYDSKFGISISNDYPGE 962
            ++G+EID +YA +L+E + N+E+Y+ISG+ +IVGGP  N  A +Y+ +F + ISNDYPGE
Sbjct: 292  IFGNEIDQQYAEELRERIQNAENYKISGNAVIVGGPLSNGFAREYNDQFEMPISNDYPGE 351

Query: 963  NNGIIQVLKVQDNTGNIIKSYKIVYIAGSDRLGTQAALEYFKTLNELPEGPIMVEWTENG 1022
            N G+IQVLK+QDN+G I+KSY IVYIAGSDRLGTQAALEYFKTL+ELPEGPIMVEWTENG
Sbjct: 352  NKGVIQVLKIQDNSGKIVKSYTIVYIAGSDRLGTQAALEYFKTLDELPEGPIMVEWTENG 411