Pairwise Alignments

Query, 197 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 363 a.a., tetratricopeptide repeat protein from Synechocystis sp000284455 PCC 6803

 Score = 43.9 bits (102), Expect = 4e-09
 Identities = 34/161 (21%), Positives = 70/161 (43%), Gaps = 39/161 (24%)

Query: 14  GALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLNMNPS 73
           G+   + EKY  A++  D+ L+   + F   + +G+ + K+ + +KA++ F+  L + P+
Sbjct: 237 GSSFLSLEKYQSAIDYLDQSLALNGNLFNGFYNRGLAYYKMGQIKKAIKDFSDALIVKPT 296

Query: 74  YIPAIKNKKQVEEKLKKQESENYNKFSKLGVENYKQGNFEKSLSYFEKAFEINPYSETLR 133
           ++ A  N+                     GV  Y  G  +KSL  + +A  I+   +   
Sbjct: 297 FVWAYINR---------------------GVAYYDLGCHQKSLDDYNQALVIDSKCKA-- 333

Query: 134 KNIETTRLKLKEILPIRWNNKGVEYYKVKNYQKALECFEKA 174
                            + N+ + + ++ N++KALE  +KA
Sbjct: 334 ----------------AYVNRSIVFRELGNHEKALEDLQKA 358



 Score = 41.6 bits (96), Expect = 2e-08
 Identities = 32/150 (21%), Positives = 63/150 (42%), Gaps = 39/150 (26%)

Query: 48  GMVFLKLKEYEKALQCFNSVLNMNPSYIPAIKNKKQVEEKLKKQESENYNKFSKLGVENY 107
           G  FL L++Y+ A+   +  L +N +                      +N F   G+  Y
Sbjct: 237 GSSFLSLEKYQSAIDYLDQSLALNGNL---------------------FNGFYNRGLAYY 275

Query: 108 KQGNFEKSLSYFEKAFEINPYSETLRKNIETTRLKLKEILPIRWNNKGVEYYKVKNYQKA 167
           K G  +K++  F  A  + P                       + N+GV YY +  +QK+
Sbjct: 276 KMGQIKKAIKDFSDALIVKP------------------TFVWAYINRGVAYYDLGCHQKS 317

Query: 168 LECFEKAVKLNPKFESALKNKTMVQKLIKN 197
           L+ + +A+ ++ K ++A  N+++V + + N
Sbjct: 318 LDDYNQALVIDSKCKAAYVNRSIVFRELGN 347



 Score = 34.7 bits (78), Expect = 2e-06
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 79  KNKKQVEEKLK-KQESENYNKFSKLGVENYKQGNFEKSLSYFEKAFEIN 126
           K++K+ E+  K   +S N+    KLGVE Y  GN   ++  F KA E N
Sbjct: 31  KSEKKFEDCTKILTKSSNHEHLFKLGVEQYILGNISDAIDSFTKALEFN 79



 Score = 33.9 bits (76), Expect = 4e-06
 Identities = 41/190 (21%), Positives = 77/190 (40%), Gaps = 37/190 (19%)

Query: 36  YYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVL----NMNPSYIP-----------AIKN 80
           +Y D  +A + K ++  +L+     L C+N +L    ++N  Y P            + N
Sbjct: 115 FYQDSVIAFYSKIIIISELQASSFILSCYNDLLQIKTDINKCYNPIELSIQGAINRLLGN 174

Query: 81  KKQVEEKLKKQESENYNKFSK--LGVENYK-QGNFEKSLSYFEKAFEINPY--------- 128
            +   EK+ +    N N  S   L  E +   G+F+ ++     +  +NP          
Sbjct: 175 TQDALEKINEALKLNSNFVSSYILRAEIHNLLGDFDAAIEDCFTSLRLNPMHINKDNTLY 234

Query: 129 ----SETLRKNIETTRLKLKEILPIRWN------NKGVEYYKVKNYQKALECFEKAVKLN 178
               S    +  ++    L + L +  N      N+G+ YYK+   +KA++ F  A+ + 
Sbjct: 235 ILGSSFLSLEKYQSAIDYLDQSLALNGNLFNGFYNRGLAYYKMGQIKKAIKDFSDALIVK 294

Query: 179 PKFESALKNK 188
           P F  A  N+
Sbjct: 295 PTFVWAYINR 304



 Score = 25.0 bits (53), Expect = 0.002
 Identities = 15/48 (31%), Positives = 24/48 (50%)

Query: 148 PIRWNNKGVEYYKVKNYQKALECFEKAVKLNPKFESALKNKTMVQKLI 195
           PI  + +G     + N Q ALE   +A+KLN  F S+   +  +  L+
Sbjct: 159 PIELSIQGAINRLLGNTQDALEKINEALKLNSNFVSSYILRAEIHNLL 206