Pairwise Alignments

Query, 197 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 296 a.a., tetratricopeptide repeat protein from Synechocystis sp000284455 PCC 6803

 Score = 51.6 bits (122), Expect = 1e-11
 Identities = 40/187 (21%), Positives = 76/187 (40%), Gaps = 38/187 (20%)

Query: 10  WHSHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLN 69
           W+  G  L    KY +AL  Y++ L YYP D+ A + +G+    L  Y  A + +++   
Sbjct: 24  WYQQGNTLWQQGKYNDALLSYERALEYYPGDYWAWYKRGITLEHLGRYRDAAESYDNACQ 83

Query: 70  MNPSYIPAIKNKKQVEEKLKKQESENYNKFSKLGVENYKQ-GNFEKSLSYFEKAFEINP- 127
           + P                     ENY  +   G     +  +F +++  F++A +  P 
Sbjct: 84  IQP---------------------ENYWAWYDQGCVYLNEIDDFAQAIPCFQRALDYLPK 122

Query: 128 ---------YSETLRKNIETTRLKLKEILPIR------WNNKGVEYYKVKNYQKALECFE 172
                     S  L    E      ++ L IR      W  +   + +  +Y +AL+C++
Sbjct: 123 DYWATYRLGESYRLSGQYEAAIASFRQTLTIRQDDFWSWYRQADCFRRWGHYAEALQCYK 182

Query: 173 KAVKLNP 179
           K++++ P
Sbjct: 183 KSLEIRP 189



 Score = 43.5 bits (101), Expect = 4e-09
 Identities = 18/48 (37%), Positives = 32/48 (66%)

Query: 23  YAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLNM 70
           YAEAL+CY K L   P+D+ A F +G ++ ++  Y +A+ C++  L++
Sbjct: 174 YAEALQCYKKSLEIRPNDYWAWFRQGELWQQIYRYGRAIACYHRALDV 221



 Score = 32.0 bits (71), Expect = 1e-05
 Identities = 15/54 (27%), Positives = 28/54 (51%)

Query: 20  SEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLNMNPS 73
           S +Y  A+  + + L+   DDF + + +   F +   Y +ALQC+   L + P+
Sbjct: 137 SGQYEAAIASFRQTLTIRQDDFWSWYRQADCFRRWGHYAEALQCYKKSLEIRPN 190



 Score = 30.0 bits (66), Expect = 4e-05
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 1/73 (1%)

Query: 10  WHSHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLN 69
           W   G L     +Y  A+ CY + L    DD  + +   +  +  K Y  A+     VL 
Sbjct: 195 WFRQGELWQQIYRYGRAIACYHRALDVEVDDDYSWYEIALCQVLQKNYSDAVYALGKVLE 254

Query: 70  MNP-SYIPAIKNK 81
             P +Y+  I+ +
Sbjct: 255 WYPGTYLSLIEGE 267



 Score = 27.7 bits (60), Expect = 2e-04
 Identities = 23/104 (22%), Positives = 47/104 (45%), Gaps = 17/104 (16%)

Query: 94  ENYNKFSKLGVENYKQGNFEKSLSYFEKAFEINP--YSETLRKNIETTRL---------- 141
           ++Y  + + G   ++QG +  +L  +E+A E  P  Y    ++ I    L          
Sbjct: 19  DSYKGWYQQGNTLWQQGKYNDALLSYERALEYYPGDYWAWYKRGITLEHLGRYRDAAESY 78

Query: 142 -KLKEILPIR---WNNKGVEYY-KVKNYQKALECFEKAVKLNPK 180
               +I P     W ++G  Y  ++ ++ +A+ CF++A+   PK
Sbjct: 79  DNACQIQPENYWAWYDQGCVYLNEIDDFAQAIPCFQRALDYLPK 122



 Score = 25.4 bits (54), Expect = 0.001
 Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 3/56 (5%)

Query: 10  WHSHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLK---EYEKALQ 62
           W+         + Y++A+    K+L +YP  +L++      F+ L+    Y+  LQ
Sbjct: 229 WYEIALCQVLQKNYSDAVYALGKVLEWYPGTYLSLIEGEPAFVDLQPLPSYQALLQ 284