Pairwise Alignments

Query, 197 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 295 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 45.8 bits (107), Expect = 8e-10
 Identities = 34/161 (21%), Positives = 73/161 (45%), Gaps = 17/161 (10%)

Query: 25  EALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLNMNPSYIPAIKNKKQV 84
           E +     +++  P D      +G  + +  E+ +A+  F+  + +NP +  A  N+  V
Sbjct: 62  ENIASLSSVIASNPSDPEGYNVRGSAYGRAGEFRRAVADFDQAIQLNPRFYQAYANRALV 121

Query: 85  EEKLKKQES--ENYNKFSKLG----VENYKQGNFEKSLSYFEKAFEINPYSETLRKNIET 138
           +  L  Q++   +YN   ++     V    +GN  +  +  + AF  N +++        
Sbjct: 122 QRNLGNQQAALADYNAALQINPNYDVAYIGRGNLYRQANQLDAAF--NDFNKA------- 172

Query: 139 TRLKLKEILPIRWNNKGVEYYKVKNYQKALECFEKAVKLNP 179
             ++L    P  ++N+G+ Y     + +A+E F KA+ L+P
Sbjct: 173 --IELDTADPRAYHNRGLIYQARNQHAQAIEDFSKAISLSP 211



 Score = 45.1 bits (105), Expect = 1e-09
 Identities = 36/161 (22%), Positives = 74/161 (45%), Gaps = 9/161 (5%)

Query: 26  ALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLNMNPSYIPAIKNKKQVE 85
           AL  Y+  L   P+  +A  G+G ++ +  + + A   FN  + ++ +   A  N+  + 
Sbjct: 131 ALADYNAALQINPNYDVAYIGRGNLYRQANQLDAAFNDFNKAIELDTADPRAYHNRGLIY 190

Query: 86  EKLKK--QESENYNKFSKLGVENYKQGNFEKSLSYFEKAFEINPYSETLRKNIETTRLKL 143
           +   +  Q  E+++K   L   + +  N  + +SY  +  + N +S+        T + L
Sbjct: 191 QARNQHAQAIEDFSKAISLSPSSPEPYN-GRGISYVAQGDDDNAFSDF------NTAINL 243

Query: 144 KEILPIRWNNKGVEYYKVKNYQKALECFEKAVKLNPKFESA 184
              L   W N+ + Y +  +  KA + +  A+ L+PK+E A
Sbjct: 244 NGKLAESWANQALIYERRGDKAKAAKSYSHALSLDPKYEPA 284



 Score = 38.9 bits (89), Expect = 9e-08
 Identities = 16/50 (32%), Positives = 32/50 (64%)

Query: 148 PIRWNNKGVEYYKVKNYQKALECFEKAVKLNPKFESALKNKTMVQKLIKN 197
           P  +N +G  Y +   +++A+  F++A++LNP+F  A  N+ +VQ+ + N
Sbjct: 78  PEGYNVRGSAYGRAGEFRRAVADFDQAIQLNPRFYQAYANRALVQRNLGN 127



 Score = 35.4 bits (80), Expect = 1e-06
 Identities = 17/78 (21%), Positives = 39/78 (50%)

Query: 10  WHSHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLN 69
           +H+ G +     ++A+A+E + K +S  P       G+G+ ++   + + A   FN+ +N
Sbjct: 183 YHNRGLIYQARNQHAQAIEDFSKAISLSPSSPEPYNGRGISYVAQGDDDNAFSDFNTAIN 242

Query: 70  MNPSYIPAIKNKKQVEEK 87
           +N     +  N+  + E+
Sbjct: 243 LNGKLAESWANQALIYER 260