Pairwise Alignments
Query, 197 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2
Subject, 393 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis JJ
Score = 67.0 bits (162), Expect = 4e-16
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 31/196 (15%)
Query: 14 GALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLNMNPS 73
G L +++ EALE Y+K+L P D G F +K+YEKA+Q ++ LN +
Sbjct: 152 GTALVGLKQFDEALEIYEKVLKISPYDTEVWKNIGNAFYTVKKYEKAIQFYDMYLNEHKG 211
Query: 74 YIPAIKNKKQVEEKLKKQES-------------ENYNKFSKLGVENYKQGNFEKSLSYFE 120
+K KL K +NY + ++G+ Y ++E ++ Y E
Sbjct: 212 DFGVTLSKGDALRKLGKTNEALDLYTKVLEKHIQNYEPWCRVGLLYYDTEDYETAIYYLE 271
Query: 121 KAFEINPYSETLRKNIETTRLKLKEILPIRWNNKGVEYYKVKNYQKALECFEKAVKLNPK 180
A E NP + ++ + T Y K++NY K LE EKA+ + +
Sbjct: 272 LANERNPLNPSILVKLGRT------------------YVKLRNYNKGLEFMEKALDKDSE 313
Query: 181 FESALKNKTMVQKLIK 196
+ A K + L++
Sbjct: 314 YAKAWCYKGYILNLLE 329
Score = 52.0 bits (123), Expect = 1e-11
Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 28/179 (15%)
Query: 19 NSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLNMNPSYIPAI 78
N+ KY +++E ++K L+ P + A + KG + L + + A + L++ P+ + I
Sbjct: 24 NNGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYQMLGKSKLAQDSYEKALSIRPNDLEII 83
Query: 79 KNK----------KQVEEKLKKQESENYNKFSKLGVENYKQGNFEKSLSYFEKAFEINPY 128
K+ K+ E LK + LG K G FE+++ ++ E P
Sbjct: 84 KSYTMLLNSLELFKESVEILKNVSESDDEIIEILGDAYLKTGKFEEAILHYNDILERKP- 142
Query: 129 SETLRKNIETTRLKLKEILPIRWNNKGVEYYKVKNYQKALECFEKAVKLNPKFESALKN 187
+ KEIL KG +K + +ALE +EK +K++P KN
Sbjct: 143 -------------RYKEILA----KKGTALVGLKQFDEALEIYEKVLKISPYDTEVWKN 184
Score = 47.8 bits (112), Expect = 3e-10
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 9/166 (5%)
Query: 22 KYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLNMNPSYIPAIKNK 81
K+ EA+ Y+ IL P + KG + LK++++AL+ + VL ++P KN
Sbjct: 126 KFEEAILHYNDILERKPRYKEILAKKGTALVGLKQFDEALEIYEKVLKISPYDTEVWKNI 185
Query: 82 KQVEEKLKKQES--ENYNKFSKLGVENYKQGNFEKSLSYFEKAFEINPYSETLRKNIETT 139
+KK E + Y+ + N +G+F +LS + ++ +E L +
Sbjct: 186 GNAFYTVKKYEKAIQFYDMYL-----NEHKGDFGVTLSKGDALRKLGKTNEALDLYTKVL 240
Query: 140 RLKLKEILPIRWNNKGVEYYKVKNYQKALECFEKAVKLNPKFESAL 185
++ P W G+ YY ++Y+ A+ E A + NP S L
Sbjct: 241 EKHIQNYEP--WCRVGLLYYDTEDYETAIYYLELANERNPLNPSIL 284
Score = 42.7 bits (99), Expect = 9e-09
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 18/100 (18%)
Query: 92 ESENYNKFSKLGVENYKQGNFEKSLSYFEKAFEINPYSETLRKNIETTRLKLKEILPIRW 151
+S++ K ++G E Y G ++KS+ YF K P KN P W
Sbjct: 8 KSKDPKKLLEIGTEYYNNGKYQKSIEYFNKTLNSEP------KN------------PDAW 49
Query: 152 NNKGVEYYKVKNYQKALECFEKAVKLNPKFESALKNKTMV 191
KG Y + + A + +EKA+ + P +K+ TM+
Sbjct: 50 YFKGNAYQMLGKSKLAQDSYEKALSIRPNDLEIIKSYTML 89
Score = 40.8 bits (94), Expect = 3e-08
Identities = 34/173 (19%), Positives = 69/173 (39%), Gaps = 28/173 (16%)
Query: 10 WHSHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLN 69
W+ G K A + Y+K LS P+D + M+ L+ ++++++ +V
Sbjct: 49 WYFKGNAYQMLGKSKLAQDSYEKALSIRPNDLEIIKSYTMLLNSLELFKESVEILKNVSE 108
Query: 70 MNPSYIPAIKNKKQVEEKLKK---------QESENYNK-FSKLGVENYKQGNFEKSLSYF 119
+ I + + K ++ + Y + +K G F+++L +
Sbjct: 109 SDDEIIEILGDAYLKTGKFEEAILHYNDILERKPRYKEILAKKGTALVGLKQFDEALEIY 168
Query: 120 EKAFEINPYSETLRKNIETTRLKLKEILPIRWNNKGVEYYKVKNYQKALECFE 172
EK +I+PY + W N G +Y VK Y+KA++ ++
Sbjct: 169 EKVLKISPYDTEV------------------WKNIGNAFYTVKKYEKAIQFYD 203
Score = 26.9 bits (58), Expect = 5e-04
Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 10 WHSHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLN 69
W G +L E++ EA++CY K +S +D V+ + + + + + + + +N
Sbjct: 318 WCYKGYILNLLERHYEAIDCYKKAISINKNDSKFWMHLSNVYKTIGKEDYSKEAYENAVN 377
Query: 70 M-NPSYIP 76
+ N + +P
Sbjct: 378 LENHNMLP 385