Pairwise Alignments

Query, 197 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 209 a.a., TPR domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 41.6 bits (96), Expect = 1e-08
 Identities = 21/81 (25%), Positives = 43/81 (53%)

Query: 1   MRNNYGIQKWHSHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKA 60
           ++N      W   G L  ++ +  EA+  Y++ L+  P+D   +   G++F    +++KA
Sbjct: 83  IKNPQDADAWTHLGHLYFDTHQAKEAIRAYERSLALKPNDPDVITDLGVMFRADHQHDKA 142

Query: 61  LQCFNSVLNMNPSYIPAIKNK 81
           L  F+  +++NP +  A+ NK
Sbjct: 143 LAAFDKAVSINPKHEIALFNK 163



 Score = 36.2 bits (82), Expect = 4e-07
 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 2/69 (2%)

Query: 123 FEINPYSETLRKNIETTRLKLKEILPIRWNNKGVEYYKVKNYQKALECFEKAVKLNPKFE 182
           F+ +   E +R    +  LK  +  P    + GV +     + KAL  F+KAV +NPK E
Sbjct: 100 FDTHQAKEAIRAYERSLALKPND--PDVITDLGVMFRADHQHDKALAAFDKAVSINPKHE 157

Query: 183 SALKNKTMV 191
            AL NK +V
Sbjct: 158 IALFNKGIV 166



 Score = 33.5 bits (75), Expect = 3e-06
 Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 1/61 (1%)

Query: 14  GALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMV-FLKLKEYEKALQCFNSVLNMNP 72
           G +     ++ +AL  +DK +S  P   +A+F KG+V +  +++ ++ L  +  +L+ NP
Sbjct: 130 GVMFRADHQHDKALAAFDKAVSINPKHEIALFNKGIVLYFDMEKKDEGLAVWRKLLSTNP 189

Query: 73  S 73
           +
Sbjct: 190 A 190



 Score = 25.4 bits (54), Expect = 7e-04
 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 19/79 (24%)

Query: 102 LGVENYKQGNFEKSLSYFEKAFEINPYSETLRKNIETTRLKLKEILPIRWNNKG-VEYYK 160
           LGV        +K+L+ F+KA  INP  E                  I   NKG V Y+ 
Sbjct: 129 LGVMFRADHQHDKALAAFDKAVSINPKHE------------------IALFNKGIVLYFD 170

Query: 161 VKNYQKALECFEKAVKLNP 179
           ++   + L  + K +  NP
Sbjct: 171 MEKKDEGLAVWRKLLSTNP 189



 Score = 22.3 bits (46), Expect = 0.006
 Identities = 7/29 (24%), Positives = 16/29 (55%)

Query: 151 WNNKGVEYYKVKNYQKALECFEKAVKLNP 179
           W + G  Y+     ++A+  +E+++ L P
Sbjct: 92  WTHLGHLYFDTHQAKEAIRAYERSLALKP 120