Pairwise Alignments

Query, 191 a.a., 3'-5' exonuclease from Methanococcus maripaludis S2

Subject, 242 a.a., DNA polymerase III subunit epsilon from Sinorhizobium meliloti 1021

 Score = 52.0 bits (123), Expect = 8e-12
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 7/114 (6%)

Query: 3   VFLDTETTGL--HPGQIAQLSYLVTDEDLNLKKVFNQYYSVDH--MSRSAAKVHGLTVEI 58
           +  DTETTGL     ++ ++  +  +      +  + Y +     +   A  VHG+T E 
Sbjct: 4   IIFDTETTGLDNREDRVIEIGGIELENQFPTGRTIHIYINPGERKVHPEALAVHGITDEF 63

Query: 59  LDELSNGMTFEDTVDEVRDDLEDSVIIGHNISFDIRFLKAEFERLGPEYVPKDK 112
           L +      F D   E+ D   D+  + HN +FDI F+ AEFERLG   +  D+
Sbjct: 64  LKDKP---PFADVAQEIVDFFGDARWVAHNATFDIGFINAEFERLGLPPIGSDR 114