Pairwise Alignments

Query, 191 a.a., 3'-5' exonuclease from Methanococcus maripaludis S2

Subject, 230 a.a., DNA polymerase III, epsilon subunit (NCBI) from Rhodospirillum rubrum S1H

 Score = 48.9 bits (115), Expect = 7e-11
 Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 19/120 (15%)

Query: 3   VFLDTETTGLHP---------GQIAQLSYLVTDEDLNLKKVFNQYYSVDH-MSRSAAKVH 52
           + LDTETTGL P         G I  ++++ +  DL+L      Y + +  M   A +VH
Sbjct: 4   IVLDTETTGLDPATGDRLVEIGCIELINHMPSGNDLHL------YVNPERDMPPEAFRVH 57

Query: 53  GLTVEILDELSNGMTFEDTVDEVRDDLEDSVIIGHNISFDIRFLKAEFERLGPEYVPKDK 112
           GL+   L   ++   F + VDE    + +  +I HN +FD++FL AE  RL    +P  +
Sbjct: 58  GLSEAFL---ADKPLFAEVVDEFLAFIGEDRLIIHNAAFDMKFLNAELARLKRPPLPMSR 114