Pairwise Alignments

Query, 191 a.a., 3'-5' exonuclease from Methanococcus maripaludis S2

Subject, 242 a.a., DNA polymerase III, epsilon subunit (RefSeq) from Shewanella loihica PV-4

 Score = 48.1 bits (113), Expect = 1e-10
 Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 14/138 (10%)

Query: 3   VFLDTETTGLHPGQIA-----QLSYLVTDEDLNLK---KVFNQYYS-VDHMSRSAAKVHG 53
           V LDTETTG++ G  A     ++  +   E +N K   + F++Y + +  +   A  VHG
Sbjct: 11  VILDTETTGMNQGAGAVYFGHRIIEIGCVEVINRKLTGRHFHEYINPMQAIDEEAITVHG 70

Query: 54  LTVEILDELSNGMTFEDTVDEVRDDLEDSVIIGHNISFDIRFLKAEFERLGPEYVPKDKF 113
           +T E +   ++   F        + ++ + I+ HN +FD+ F+  EF  L P        
Sbjct: 71  ITNEFV---ADKPVFAQIAPAFLEFIDGAEIVAHNANFDVSFMDHEFSLLTPRGPKTTDI 127

Query: 114 CTMFHFTPICKL--PGQK 129
           C +     I K   PGQK
Sbjct: 128 CQVLDSLEIAKFLHPGQK 145