Pairwise Alignments

Query, 191 a.a., 3'-5' exonuclease from Methanococcus maripaludis S2

Subject, 488 a.a., exonuclease, DNA polymerase III, epsilon subunit family from Dechlorosoma suillum PS

 Score = 44.3 bits (103), Expect = 4e-09
 Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 25/146 (17%)

Query: 3   VFLDTETTGLHP--GQIAQLSYLVTDEDLNLKKVFNQYYSVDHMSRSAAKVHGLTVEILD 60
           VF+D ETTG +P   +I ++  +    +++   V      V+        + GLT  I D
Sbjct: 20  VFVDLETTGANPVRDRITEIGIV----EVSAAGVTQWSSLVNPGIPIPPFIQGLT-NISD 74

Query: 61  EL-SNGMTFEDTVDEVRDDLEDSVIIGHNISFDIRFLKAEFERLGPEYVPKDKFCTMFHF 119
           E+ ++   F D  +EV   L+  + + HN  FD  FLK EF RLG            FH 
Sbjct: 75  EMVADAPPFADLAEEVLGRLKGRLFVAHNARFDYGFLKNEFRRLG----------LKFHA 124

Query: 120 TPICKL-------PGQKRYKRPKLVE 138
           T +C +       P   R+    LVE
Sbjct: 125 TVLCTVKLSRKLEPQHHRHSLDALVE 150