Pairwise Alignments

Query, 191 a.a., 3'-5' exonuclease from Methanococcus maripaludis S2

Subject, 242 a.a., DNA polymerase III, epsilon subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 50.8 bits (120), Expect = 2e-11
 Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 14/138 (10%)

Query: 3   VFLDTETTGLHPGQIA-QLSYLVTD----EDLNLK---KVFNQYYSVDH-MSRSAAKVHG 53
           V LDTETTG++ G  A  L + + +    E +N +   + ++QY +    +   A  VHG
Sbjct: 11  VILDTETTGMNQGSGAVYLGHRIIEIGCVEVINRRLTGRYYHQYINPGQAIDPEAIAVHG 70

Query: 54  LTVEILDELSNGMTFEDTVDEVRDDLEDSVIIGHNISFDIRFLKAEFERLGPEYVPKDKF 113
           +T E    ++N   F     E  D +  + I+ HN +FD+ F+  EF  L P        
Sbjct: 71  ITDE---RVANEPRFHQIAQEFIDFISGAEIVAHNANFDVSFMDHEFSLLQPLGPKTRDI 127

Query: 114 CTMFHFTPICKL--PGQK 129
           C +     I K   PGQK
Sbjct: 128 CEILDSLDIAKFLHPGQK 145