Pairwise Alignments

Query, 747 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 1427 a.a., Lhr-like helicases from Pseudomonas fluorescens FW300-N2E2

 Score = 68.6 bits (166), Expect = 2e-15
 Identities = 89/363 (24%), Positives = 152/363 (41%), Gaps = 69/363 (19%)

Query: 27  LFDKTKNFLICIPTASGKTLIGEMALLNHILDENKNLTGKKG----LFIVPLKALANE-- 80
           L  + ++ L+  PT SGKTL   +A+L+ ++       G       +++ PLKAL+N+  
Sbjct: 29  LIGQRRSTLVAAPTGSGKTLTAFLAVLDDLVHRGLEQGGLPDQTLVVYVSPLKALSNDIQ 88

Query: 81  -----KFDEFKEKYEKYG-----IKVGLSIGDFDTKENLSKF----HIIITTSEKLDSLM 126
                      E+  +       I   +  GD   KE  +      HI++TT E L  L+
Sbjct: 89  INLQNPLAGITEQLRRMDLPPLHITTAVRTGDTPQKERSAMRKTAPHILVTTPESLYVLL 148

Query: 127 RHEV--EWINDVSLAVIDEIHLIGDNDRGGTLEVILTKLKNLNAQI---VGLSATIGNPE 181
             +   + +      ++DEIH I  + RG  L + L +L+ L A+    +GLSAT    E
Sbjct: 149 GSDSGRQMLASTRTVIVDEIHAIAASKRGSHLALSLERLQALCAEPLMRIGLSATQKPIE 208

Query: 182 ELSNWLNAKLIVDEWRPVELKK-GIYFENELEFVKSPAKKIKQVSKNNITDLIVDSVEEK 240
            +S +L     V E R  E+   G     +L+ ++ P   +  V  N++ +L+ + + E 
Sbjct: 209 AVSRFL-----VGEGRSCEIVDIGHARPRDLD-IEVPPVPLSAVMANDVWELVYNRLAEL 262

Query: 241 GSCLIFCNSKRNAVGEAKKHNLTKYLTRTEQHELNKLSEEILSILDTPTETCKALSECI- 299
                           A++H  T     T      +L+E +           + LSE + 
Sbjct: 263 ----------------AREHRTTLVFVNTR-----RLAERL----------SRHLSERLG 291

Query: 300 KKGIAFHHAGLTYQHRKIVEDGFRNRLIKVICCTPTLSAGL-----NLPCRRAIVRDIKR 354
           K  +A HH  L  + R   E   +   +KV+  T +L  G+     +L C+ A  R I  
Sbjct: 292 KDAVAAHHGSLAKEFRLDAEQRLKRGELKVLIATASLELGIDIGDVDLVCQIASPRSISA 351

Query: 355 YSQ 357
           + Q
Sbjct: 352 FLQ 354