Pairwise Alignments

Query, 747 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 1437 a.a., ATP-dependent DNA helicase from Pseudomonas fluorescens FW300-N2C3

 Score = 69.3 bits (168), Expect = 1e-15
 Identities = 87/366 (23%), Positives = 152/366 (41%), Gaps = 75/366 (20%)

Query: 27  LFDKTKNFLICIPTASGKTLIGEMALLNHILDENKNLTGKKG----LFIVPLKALANE-- 80
           L  + ++ L+  PT SGKTL   +A+L+ ++       G       +++ PLKAL+N+  
Sbjct: 39  LIGQRRSVLVAAPTGSGKTLTAFLAVLDDLVHRGLEQGGLPDQTLVVYVSPLKALSNDIQ 98

Query: 81  -----KFDEFKEKYEKYG-----IKVGLSIGDFDTKENLSKF----HIIITTSEKLDSLM 126
                      E+ ++ G     I   +  GD   K+  +      HI++TT E L  L+
Sbjct: 99  INLQNPLAGITEQLQRMGLPPLPITTAVRTGDTPQKDRSAMRKTAPHILVTTPESLYVLL 158

Query: 127 RHEV--EWINDVSLAVIDEIHLIGDNDRGGTLEVILTKLKNLNAQ---IVGLSATIGNPE 181
             +   + +      ++DEIH I  + RG  L + L +L+ L A+    +GLSAT    E
Sbjct: 159 GSDSGRQMLASTRTVIVDEIHAIAASKRGSHLALSLERLQALCAEPLMRIGLSATQKPIE 218

Query: 182 ELSNWLNAKLIVDEWRPVELKK-GIYFENELEFVKSPAKKIKQVSKNNITDLIVDSVEEK 240
            +S +L     V E R  E+   G     +L+ ++ P   +  V  N++ +L+ + + E 
Sbjct: 219 AVSRFL-----VGEGRACEIVDIGHARPRDLD-IEVPPVPLSAVMANDVWELVYNRLAEL 272

Query: 241 G----SCLIFCNSKRNAVGEAKKHNLTKYLTRTEQHELNKLSEEILSILDTPTETCKALS 296
                + L+F N++R A              R  +H   +L                   
Sbjct: 273 ARAHRTTLVFVNTRRLA-------------ERLSRHLSERLG------------------ 301

Query: 297 ECIKKGIAFHHAGLTYQHRKIVEDGFRNRLIKVICCTPTLSAGL-----NLPCRRAIVRD 351
              K  +A HH  L  + R   E   +   ++V+  T +L  G+     +L C+ A  R 
Sbjct: 302 ---KDAVAAHHGSLAKEFRLDAEQRLKRGELQVLIATASLELGIDIGDVDLVCQIASPRS 358

Query: 352 IKRYSQ 357
           I  + Q
Sbjct: 359 ISAFLQ 364