Pairwise Alignments

Query, 747 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 1475 a.a., Lhr-like helicases from Pseudomonas stutzeri RCH2

 Score = 70.9 bits (172), Expect = 5e-16
 Identities = 87/360 (24%), Positives = 149/360 (41%), Gaps = 73/360 (20%)

Query: 32  KNFLICIPTASGKTLIGEMALLNHILDENKNLTG----KKGLFIVPLKALANEKFDEFKE 87
           ++ L+  PT SGKTL   +A ++ ++ +     G     + L++ PLKAL+N+     +E
Sbjct: 65  RSTLVAAPTGSGKTLTAFLAAIDGLVQQGLAEGGLADATRVLYVSPLKALSNDIHINLEE 124

Query: 88  -------KYEKYG-----IKVGLSIGDFDTKENLSKF----HIIITTSEKLDSLMRHEV- 130
                  +  + G     I+  +  GD    E  +      HI++TT E L  L+     
Sbjct: 125 PLAGITAELARLGLPPLEIRTAVRTGDTPQAERNAMRKRVPHILVTTPESLYVLLSSASG 184

Query: 131 -EWINDVSLAVIDEIHLIGDNDRGGTLEVILTKLKNL-NAQI--VGLSATIGNPEELSNW 186
            E + DV   ++DEIH I  N RG  L + L +L+ L N  +  VGLSAT    + +   
Sbjct: 185 REMLADVQSVIVDEIHAIAGNKRGSHLALSLERLEALCNRPLVRVGLSATQKPIDAV--- 241

Query: 187 LNAKLIVDEWRPVELKKGIYFENELEFVKSPAKKIKQVSKNNITDLIVDSVE----EKGS 242
             A+ +    RP E+    +       ++ P+  ++ V  N+   L+ D +     E  +
Sbjct: 242 --ARFLAGVERPCEIVDIGHGRARDLALEVPSVPLEAVMSNDAWALVYDRLAALAGEHRT 299

Query: 243 CLIFCNSKRNAVGEAKKHNLTKYLTRTEQHELNKLSEEILSILDTPTETCKALSECIKKG 302
            L+F N++R A              RT +H   +L  E+                     
Sbjct: 300 TLVFVNTRRMA-------------ERTTRHLAERLGAEV--------------------- 325

Query: 303 IAFHHAGLTYQHRKIVEDGFRNRLIKVICCTPTLSAGLN-----LPCRRAIVRDIKRYSQ 357
           +A HH  L  + R   E   +   ++V+  T +L  G++     L C+    R I  + Q
Sbjct: 326 VAAHHGSLAREQRLSAEQKLKRGELRVLVATASLELGIDIGDVELVCQLGSPRSISAFLQ 385