Pairwise Alignments

Query, 747 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 831 a.a., ATP-dependent RNA helicase from Xanthomonas campestris pv. campestris strain 8004

 Score = 50.1 bits (118), Expect = 5e-10
 Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 23/161 (14%)

Query: 36  ICIPTASGKTLIGEMALLNHILDENKNLTGKKGLFIVPLKALANEKFDEFKE--KYEKYG 93
           I  PTASGK+L   + +++  +       G K L++ P KALA ++  E  E  +  + G
Sbjct: 98  IVTPTASGKSLCYTLPVVSAAMT-----AGAKALYLFPTKALAQDQVAELLELNRAGELG 152

Query: 94  IKVGLSIGDF--DTKENLSKFH--IIITTSEKL-DSLMRHEVEW---INDVSLAVIDEIH 145
           +K     GD   D ++ + + H  I+++  + L  +++ H  +W     ++   VIDEIH
Sbjct: 153 VKAFTFDGDTPGDARQAI-RLHGDIVVSNPDMLHQAILPHHTKWAQFFENLRYVVIDEIH 211

Query: 146 LIGDNDRGGTLEVILTKLKNL------NAQIVGLSATIGNP 180
                  G  +  +L +LK +      N Q +  SATIGNP
Sbjct: 212 TY-RGVFGSHVTNVLRRLKRICAFYGANPQFILCSATIGNP 251