Pairwise Alignments

Query, 747 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 1205 a.a., Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score = 64.3 bits (155), Expect = 4e-14
 Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 7/130 (5%)

Query: 30  KTKNFLICIPTASGKTLIGEMALLNHILDENKNLTGKKGLFIVPLKALANE----KFDEF 85
           K+ +F +C PT SGKTL+  +AL+  ++      +G   L++VP +ALA E       E 
Sbjct: 299 KSSSFALCTPTGSGKTLVANLALIKELMLAPSEKSGPLALYLVPSRALAGEVEAKLLSEL 358

Query: 86  KEKYEKYGIKVGLSIGDFDTKENLSKFHIIITTSEKLDSLMRHEVEWI-NDVSLAVIDEI 144
                  G+  G   G  D   N  K  ++I T EK D+LMR+    I   + L +IDE 
Sbjct: 359 GSDLVVTGLYGGSDWGITDYWLNAEKPTVLIATVEKADALMRYVGPLIVARLQLLIIDEA 418

Query: 145 H--LIGDNDR 152
           H  ++ D DR
Sbjct: 419 HQVVVADRDR 428



 Score = 44.7 bits (104), Expect = 3e-08
 Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 12/138 (8%)

Query: 299 IKKGIAFHHAGLTYQHRKIVEDGFRNRLIKVICCTPTLSAGLNLPCRRAIVRDIKRYSQN 358
           + +GIA  H  +  + R+++      R+  +   T TL+ G+NLP    +V  I R   +
Sbjct: 634 LDRGIATSHGQMPQRLRRLMTSLIDRRICPITVATATLTEGVNLPFDLILVPSITRQFYD 693

Query: 359 GLVDIPRM------EIQQCIGRAGRPGLDPYGEGIIYIKNEKEIEKAYEILTGSVENIYS 412
            + +  ++      E +   GRAGRPG     EGI  +    +        T +   I S
Sbjct: 694 AVSEKSKVTPFSAAEFRNLAGRAGRPGNAQGPEGITLVAIPTQPS------TTAPRQIAS 747

Query: 413 KLANQKVLRIHILGLIST 430
           +      LR H  GL+S+
Sbjct: 748 QTKQLGQLRTHYSGLLSS 765