Pairwise Alignments

Query, 747 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 849 a.a., DNA damage response helicase, ligase-associated (from data) from Sinorhizobium meliloti 1021

 Score = 76.3 bits (186), Expect = 6e-18
 Identities = 82/324 (25%), Positives = 140/324 (43%), Gaps = 51/324 (15%)

Query: 35  LICIPTASGKTLIGEMALLNHILDENK-----NLTGKKGLFIVPLKALANEKFDEFKEKY 89
           L+  PT +GKTL G +  L  I    +       TG   L+I PLKALA +      +  
Sbjct: 52  LLIAPTGAGKTLAGFLPSLVDITRRGRIPPGAPFTGIHTLYISPLKALAVDIERNLMKPV 111

Query: 90  EKYGIKVGLSIGDFDT------KENLSKFHIIITTSEKLDSLMRH-EVE-WINDVSLAVI 141
            + G+ V +     DT      ++ L+   I++TT E+L  L+ + E E +  D+   V+
Sbjct: 112 GEMGLPVSIENRTGDTPQGKRQRQKLNPPDILLTTPEQLALLLANGEAERFFKDLRYVVL 171

Query: 142 DEIHLIGDNDRGGTLEVILTKLKNL--NAQIVGLSATIGNPEELSNWLNAKLIVDEWRP- 198
           DE+H +  + RG  L + L +L+ L    Q +GLSAT+ +P +L  WL A+ +  E    
Sbjct: 172 DELHSLVMSKRGHLLSLGLARLRRLAPRLQTMGLSATVADPMDLQRWLVAQFLAKENHAG 231

Query: 199 -VELKKGIYFENELEFVKSPAKKIKQVSKNNITDLIVDSVEEKGSCLIFCNSKRNAVGEA 257
            + +  G   E  +   ++        ++  I D +  +++E  + L+F N++  A    
Sbjct: 232 LITVSGGAKPEISILRTENQVPWAGHSARYAIPD-VYAAIKEHRTTLLFVNTRSQA---- 286

Query: 258 KKHNLTKYLTRTEQHELNKLSEEILSILDTPTETCKALSECIKKGIAFHHAGLTYQHRKI 317
                          EL K++++     D P              IA HH  L    R+ 
Sbjct: 287 ----------EMLFQELWKINDD-----DLP--------------IALHHGSLDVAQRRR 317

Query: 318 VEDGFRNRLIKVICCTPTLSAGLN 341
           VE       ++ +  T TL  G++
Sbjct: 318 VEAAMAENRLRAVVATSTLDLGID 341