Pairwise Alignments

Query, 747 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 869 a.a., DEAD/DEAH box helicase (NCBI) from Rhodospirillum rubrum S1H

 Score = 68.2 bits (165), Expect = 2e-15
 Identities = 91/386 (23%), Positives = 167/386 (43%), Gaps = 57/386 (14%)

Query: 39  PTASGKTLIGEMALLNHILDENKNLTGKKGLFIVPLKALANEKFDEFKEKYEKYG-IKVG 97
           PTASGKT +    +L  ++D+         +++ P +AL +E     +    K G I++ 
Sbjct: 167 PTASGKTFL----VLQWLVDQMVVGAATIAVYLAPTRALVSEIEANLQALLGKGGPIEIS 222

Query: 98  -LSIGD-FDTKENLSKFHIIITTSEKLDSLMRHEVEWINDVSLAVIDEIHLIGDNDRGGT 155
            L + + +D     S+  +++ T E+L  L+ + +     + L ++DE H IGDN RG  
Sbjct: 223 CLPLREKYDAARAGSRRLVLVFTQERLH-LLANVLGKDFLIDLLIVDEAHKIGDNQRGVI 281

Query: 156 LEVILTKLKNLN--AQIVGLSATIGNPEEL-----------------SNWLNAKLIVDE- 195
           L+  + +    N   +IV +S    NPEEL                    L   ++ D+ 
Sbjct: 282 LQDAIERATRANQKLKIVFISPGTQNPEELLSDAPEGVETVAVNSDAPTVLQNLIVADQV 341

Query: 196 ------WRPVELKKGIYFE-NELEFVKSPAKKIKQVSKNNITDLIVDSVEEKGSCLIFCN 248
                 W     ++ +      LE   +P    K+++       I  +  ++G  L++ N
Sbjct: 342 PRKPKLWNLAVRQQDVLLPIGTLELSSTPEGSRKRLA------FIAAAAGQRGGTLVYAN 395

Query: 249 SKRNAVGEAKK-HNLTKYLTRTEQHELNKLSEEILSILDTPTETCK---ALSECIKKGIA 304
           +     GE++K  +L   L        +++  E+ ++ D   +       L+  +++G+A
Sbjct: 396 T----AGESEKVADLISQLLPAP----DEIDTELAALADLARKGVHPNFRLAPLVERGVA 447

Query: 305 FHHAGLTYQHRKIVEDGFRNRLIKVICCTPTLSAGLNLPCRRAIVRDIKRYSQNGLVDIP 364
           FH   +    R  +E  FR+  I+ + CT TL  G+NL CR  ++R  ++        + 
Sbjct: 448 FHFGNMPSLIRIEIERLFRSGKIRFLVCTSTLIEGVNLSCRTIVLRGPRKGIGR---PME 504

Query: 365 RMEIQQCIGRAGRPGLDPYGEGIIYI 390
             +     GRAGR G D +   II I
Sbjct: 505 PHDFWNLAGRAGRWG-DEFQGNIICI 529