Pairwise Alignments

Query, 747 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 1198 a.a., DEAD/DEAH box helicase domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 55.8 bits (133), Expect = 1e-11
 Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 25/200 (12%)

Query: 3   VLDILKENKITELRPPQKKVIDEGLFDKTKNFLICIPTASGKTLIGEMALLNHILDENKN 62
           + DIL  N I +L   Q +  D  L    ++ ++  PTASGKT +  + +L   L +   
Sbjct: 103 IRDILARNGIGDLYTHQARATD--LIRAGRHVVVATPTASGKTYVYNLPVLERFLSD--- 157

Query: 63  LTGKKGLFIVPLKALANEKFDEF--------KEKYEKYGIKVGLSIGDFDTKENLSKFHI 114
               + L++ PLKALA ++   F         +   +  I  G +   F  K   +   +
Sbjct: 158 -PDARALYLFPLKALAQDQLSTFTGLTAAWPDDARPRAAIYDGDTTDHFRRKIRQNPPTV 216

Query: 115 IITTSEKLD-SLMRHEVEW---INDVSLAVIDEIHLIGDNDRGGTLEVILTKLKNLNAQ- 169
           ++T  E L  +++ H  +W   +  ++  V+DE+H       G  +  +  +L  + A+ 
Sbjct: 217 LLTNPEMLHLAILPHHQQWTSLLASLAFIVVDEVHTY-RGVLGAHMAQVFRRLLRVCARY 275

Query: 170 -----IVGLSATIGNPEELS 184
                 V  SAT+GNP EL+
Sbjct: 276 GAHPTFVFCSATVGNPGELA 295