Pairwise Alignments

Query, 747 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 1121 a.a., ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 57.4 bits (137), Expect = 4e-12
 Identities = 62/270 (22%), Positives = 119/270 (44%), Gaps = 40/270 (14%)

Query: 3   VLDILKENKITELRPPQKKVIDEGLFDKTKNFLICIPTASGKTLIGEMALLNHILDENKN 62
           V DIL    I +L   Q +  D  +    ++ ++  PTASGKT I  + +L   L +   
Sbjct: 121 VQDILTRQGIADLYSHQARATD--IIRAGRDVVVATPTASGKTFIYNLPVLEQFLRD--- 175

Query: 63  LTGKKGLFIVPLKALANEKFDEFKEKYEKY--GIKVGLSIGDFDTKENLSKF------HI 114
               + +++ PLKALA ++   F      +    +   +I D DT ++  +        +
Sbjct: 176 -PDARAIYLFPLKALAQDQLATFNALTAHWPRDARPAAAIYDGDTTDHFRRKIRNAPPPV 234

Query: 115 IITTSEKLD-SLMRHEVEWIN---DVSLAVIDEIHLIGDNDRGGTLEVILTKLKNL---- 166
           ++T  E L  +L+ H  +W +    ++  V+DE+H       G  +  +  +L+ +    
Sbjct: 235 LLTNPEMLHLALLPHHEQWASLFASLTHVVVDEVHTY-RGVLGAHMAQVFRRLRRVCERY 293

Query: 167 --NAQIVGLSATIGNPEELSN---WLNAKLIVDEWRPVELKKGIYFENELEFVKSPAKKI 221
                 V  SAT+GNP EL++    L  +++ +   P   +  I+ + E    +SPA   
Sbjct: 294 GAQPSFVFCSATVGNPGELAHNLTGLTPEVVTESGAPQGKRHFIFLDPE----ESPATAA 349

Query: 222 KQVSKNNITDLIVDSVEEKGSCLIFCNSKR 251
            Q        L+  +++     +++C S+R
Sbjct: 350 IQ--------LLRSALKRGLRTIVYCQSRR 371