Pairwise Alignments

Query, 212 a.a., cobalt transporter CbiM from Methanococcus maripaludis S2

Subject, 204 a.a., component of nickel ABC transport system (Dmitry Rodionov) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 79.7 bits (195), Expect = 4e-20
 Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 10/204 (4%)

Query: 1   MHIPDGFIPLWESGIFWVISLIFLSMSLRWASKEMNEKTVPLFTALAAGIFAIQAMNMPI 60
           MHI +G +P   S +    +L     +L    + ++   V     LAA  F    +++P+
Sbjct: 1   MHISEGVLPA--SVLLGGAALTAAGTAL--GLRRIDWDRVMTVALLAAAFFVASLIHVPV 56

Query: 61  PWGTSGHMVGAALTAIVFDSPWAAVLMLALVLIVQGLFFADGGLIVMGTNIFNMGVVGGF 120
               S H+V   L  ++    WAA   + + L++Q L F  GGL+V+G N FNM +    
Sbjct: 57  G-PVSAHLVLNGLIGVILG--WAAFPAILVALLLQALLFQFGGLLVLGVNTFNMALPPVI 113

Query: 121 VGYYLFKALKKTNF--HAAVFTAGWAATFLASIACAVELAIAGTFPIDLGIQFMGLYHAV 178
             Y   KAL  T+     A F  G+ +  L++   A+ L +AG   I    Q + + H  
Sbjct: 114 CHYLFRKALTGTSTPRTGAAFACGFLSVLLSASLTALSLGLAGEGFIP-AAQSLLIAHLP 172

Query: 179 IGIIEGLITAIVVGYLASARPDLV 202
           + ++EG ITA+V+G+L   RP+++
Sbjct: 173 VMVVEGCITALVIGFLYKVRPEVL 196