Pairwise Alignments
Query, 388 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2
Subject, 287 a.a., TPR repeat from Synechococcus elongatus PCC 7942
Score = 50.8 bits (120), Expect = 5e-11
Identities = 40/176 (22%), Positives = 75/176 (42%), Gaps = 2/176 (1%)
Query: 93 LELFKESVEILKNVSESDDKIIEILGDAYLKTGKFNEAILQYNNILERKPRYKEILAKKG 152
+E + + ++ +D ++ +L DA L+ + + AI + PR IL G
Sbjct: 58 IEFAQRQAALATQLAPNDFRVWLVLADASLRLNQLDPAIAALEKAQKLSPREPAILFALG 117
Query: 153 TALVGLKKFDEALEIYEKVLKISPYDTEVWKNIGNAFYTVKKYEKAIQFYDMYLNEHKGD 212
+A + EA ++ L I P + ++GN + K+Y AI + + + K D
Sbjct: 118 SARFRQGNYSEAASFLQRGLAIKPDSSGALFDLGNVYLIQKQYPPAIAAFQKAV-QVKPD 176
Query: 213 FGVTLSK-GDALRKLGKTNEALDLYTKVLEKHIQNYEPWCRVGLLYYDTEDYETAI 267
F ++ G + G N+AL+ + + +E EP +L Y E A+
Sbjct: 177 FWEAINNLGLVSYEQGDRNQALNYWNRAIELSKDAAEPVLAKAVLVYQQGQTEEAV 232
Score = 41.6 bits (96), Expect = 3e-08
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 7/117 (5%)
Query: 264 ETAIYYLELANERNPLNPSILVKLGRTYVKLRNYNKGLEFMEKALDKDSEYAKAWCYKGY 323
+ AI LE A + +P P+IL LG + NY++ F+++ L + + A G
Sbjct: 93 DPAIAALEKAQKLSPREPAILFALGSARFRQGNYSEAASFLQRGLAIKPDSSGALFDLGN 152
Query: 324 ILNLLERHYEAIDCYKKAISINKNDSKFWMHLSNVYKTIGKEDYSKEAYENAVNLEN 380
+ + +++ AI ++KA+ + + FW ++N +G Y + A+N N
Sbjct: 153 VYLIQKQYPPAIAAFQKAVQVKPD---FWEAINN----LGLVSYEQGDRNQALNYWN 202
Score = 41.2 bits (95), Expect = 4e-08
Identities = 38/163 (23%), Positives = 69/163 (42%), Gaps = 4/163 (2%)
Query: 154 ALVGLKKFDEALEIYEKVLKISPYDTEVWKNIGNAFYTVKKYEKAIQFYDMYLNEHKGDF 213
A + L + D A+ EK K+SP + + +G+A + Y +A F L
Sbjct: 85 ASLRLNQLDPAIAALEKAQKLSPREPAILFALGSARFRQGNYSEAASFLQRGLAIKPDSS 144
Query: 214 GVTLSKGDALRKLGKTNEALDLYTKVLEKHIQNYEPWCRVGLLYYDTEDYETAIYYLELA 273
G G+ + A+ + K ++ +E +GL+ Y+ D A+ Y A
Sbjct: 145 GALFDLGNVYLIQKQYPPAIAAFQKAVQVKPDFWEAINNLGLVSYEQGDRNQALNYWNRA 204
Query: 274 NE--RNPLNPSILVKLGRTYVKLRNYNKGLEFMEKALDKDSEY 314
E ++ P +L K Y + + + + ++AL KDS+Y
Sbjct: 205 IELSKDAAEP-VLAKAVLVYQQGQT-EEAVRLAQQALGKDSQY 245
Score = 38.1 bits (87), Expect = 3e-07
Identities = 29/144 (20%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Query: 10 KDPKKLLETGTEYYNSGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSY 69
++P L G+ + G Y ++ + + L +P + A + GN Y + + A ++
Sbjct: 108 REPAILFALGSARFRQGNYSEAASFLQRGLAIKPDSSGALFDLGNVYLIQKQYPPAIAAF 167
Query: 70 EKALSIRPNDLEIIKSYTMLL-------NSLELFKESVEILKNVSESDDKIIEILGDAYL 122
+KA+ ++P+ E I + ++ +L + ++E+ K+ +E +L A L
Sbjct: 168 QKAVQVKPDFWEAINNLGLVSYEQGDRNQALNYWNRAIELSKDAAE------PVLAKAVL 221
Query: 123 --KTGKFNEAILQYNNILERKPRY 144
+ G+ EA+ L + +Y
Sbjct: 222 VYQQGQTEEAVRLAQQALGKDSQY 245
Score = 32.7 bits (73), Expect = 1e-05
Identities = 34/196 (17%), Positives = 79/196 (40%)
Query: 147 ILAKKGTALVGLKKFDEALEIYEKVLKISPYDTEVWKNIGNAFYTVKKYEKAIQFYDMYL 206
+LA++ L+ ++ + A +++P D VW + +A + + + AI +
Sbjct: 44 VLAQEAAQLLQFQQIEFAQRQAALATQLAPNDFRVWLVLADASLRLNQLDPAIAALEKAQ 103
Query: 207 NEHKGDFGVTLSKGDALRKLGKTNEALDLYTKVLEKHIQNYEPWCRVGLLYYDTEDYETA 266
+ + + G A + G +EA + L + +G +Y + Y A
Sbjct: 104 KLSPREPAILFALGSARFRQGNYSEAASFLQRGLAIKPDSSGALFDLGNVYLIQKQYPPA 163
Query: 267 IYYLELANERNPLNPSILVKLGRTYVKLRNYNKGLEFMEKALDKDSEYAKAWCYKGYILN 326
I + A + P + LG + + N+ L + +A++ + A+ K ++
Sbjct: 164 IAAFQKAVQVKPDFWEAINNLGLVSYEQGDRNQALNYWNRAIELSKDAAEPVLAKAVLVY 223
Query: 327 LLERHYEAIDCYKKAI 342
+ EA+ ++A+
Sbjct: 224 QQGQTEEAVRLAQQAL 239
Score = 26.9 bits (58), Expect = 7e-04
Identities = 31/152 (20%), Positives = 61/152 (40%), Gaps = 17/152 (11%)
Query: 31 SIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYEKALSIRP----------NDL 80
+I K P+ P + G+A G A ++ L+I+P N
Sbjct: 95 AIAALEKAQKLSPREPAILFALGSARFRQGNYSEAASFLQRGLAIKPDSSGALFDLGNVY 154
Query: 81 EIIKSYTMLLNSLELFKESVEILKNVSESDDKIIEILGDAYLKTGKFNEAILQYNNILER 140
I K Y ++ F+++V++ + E+ I LG + G N+A+ +N +E
Sbjct: 155 LIQKQYP---PAIAAFQKAVQVKPDFWEA----INNLGLVSYEQGDRNQALNYWNRAIEL 207
Query: 141 KPRYKEILAKKGTALVGLKKFDEALEIYEKVL 172
E + K + + +EA+ + ++ L
Sbjct: 208 SKDAAEPVLAKAVLVYQQGQTEEAVRLAQQAL 239