Pairwise Alignments
Query, 388 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2
Subject, 209 a.a., TPR domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710
Score = 48.5 bits (114), Expect = 2e-10
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 230 NEALDLYTKVLEKHIQNYEPWCRVGLLYYDTEDYETAIYYLELANERNPLNPSILVKLGR 289
N L+L V+ K+ Q+ + W +G LY+DT + AI E + P +P ++ LG
Sbjct: 73 NRILELEQAVI-KNPQDADAWTHLGHLYFDTHQAKEAIRAYERSLALKPNDPDVITDLGV 131
Query: 290 TYVKLRNYNKGLEFMEKALDKDSEYAKAWCYKGYILNL-LERHYEAIDCYKKAISIN 345
+ ++K L +KA+ + ++ A KG +L +E+ E + ++K +S N
Sbjct: 132 MFRADHQHDKALAAFDKAVSINPKHEIALFNKGIVLYFDMEKKDEGLAVWRKLLSTN 188
Score = 43.9 bits (102), Expect = 4e-09
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 38/151 (25%)
Query: 33 EYFNKTLNSE------PKNPDAWYFKGNAYHMLGKSKLAQDSYEKALSIRPNDLEIIKSY 86
E N+ L E P++ DAW G+ Y ++K A +YE++L+++PND ++I
Sbjct: 70 EVMNRILELEQAVIKNPQDADAWTHLGHLYFDTHQAKEAIRAYERSLALKPNDPDVITD- 128
Query: 87 TMLLNSLELFKESVEILKNVSESDDKIIEILGDAYLKTGKFNEAILQYNNILERKPRYKE 146
LG + + ++A+ ++ + P+++
Sbjct: 129 ------------------------------LGVMFRADHQHDKALAAFDKAVSINPKHEI 158
Query: 147 ILAKKGTAL-VGLKKFDEALEIYEKVLKISP 176
L KG L ++K DE L ++ K+L +P
Sbjct: 159 ALFNKGIVLYFDMEKKDEGLAVWRKLLSTNP 189
Score = 37.4 bits (85), Expect = 4e-07
Identities = 21/81 (25%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 298 NKGLEFMEKALDKDSEYAKAWCYKGYILNLLERHYEAIDCYKKAISINKNDSKFWMHLSN 357
N+ LE +E+A+ K+ + A AW + G++ + EAI Y++++++ ND L
Sbjct: 73 NRILE-LEQAVIKNPQDADAWTHLGHLYFDTHQAKEAIRAYERSLALKPNDPDVITDLGV 131
Query: 358 VYKTIGKEDYSKEAYENAVNL 378
+++ + D + A++ AV++
Sbjct: 132 MFRADHQHDKALAAFDKAVSI 152
Score = 35.4 bits (80), Expect = 1e-06
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Query: 102 ILKNVSESDDKIIEILGDAYLKTGKFNEAILQYNNILERKPRYKEILAKKGTALVGLKKF 161
++KN ++D LG Y T + EAI Y L KP +++ G +
Sbjct: 82 VIKNPQDAD--AWTHLGHLYFDTHQAKEAIRAYERSLALKPNDPDVITDLGVMFRADHQH 139
Query: 162 DEALEIYEKVLKISPYDTEVWKNIGNAFY 190
D+AL ++K + I+P N G Y
Sbjct: 140 DKALAAFDKAVSINPKHEIALFNKGIVLY 168
Score = 34.3 bits (77), Expect = 3e-06
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 131 ILQYNNILERKPRYKEILAKKGTALVGLKKFDEALEIYEKVLKISPYDTEVWKNIGNAFY 190
IL+ + + P+ + G + EA+ YE+ L + P D +V ++G F
Sbjct: 75 ILELEQAVIKNPQDADAWTHLGHLYFDTHQAKEAIRAYERSLALKPNDPDVITDLGVMFR 134
Query: 191 TVKKYEKAIQFYDMYLNEHKGDFGVTLSKGDALR-KLGKTNEALDLYTKVL 240
+++KA+ +D ++ + +KG L + K +E L ++ K+L
Sbjct: 135 ADHQHDKALAAFDKAVSINPKHEIALFNKGIVLYFDMEKKDEGLAVWRKLL 185
Score = 28.5 bits (62), Expect = 2e-04
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 8 KSKDPKKLLETGTEYYNSGKYQKSIEYFNKTLNSEPKNPDAWYFKGNA-YHMLGKSKLAQ 66
K DP + + G + ++ K++ F+K ++ PK+ A + KG Y + K
Sbjct: 119 KPNDPDVITDLGVMFRADHQHDKALAAFDKAVSINPKHEIALFNKGIVLYFDMEKKDEGL 178
Query: 67 DSYEKALSIRP 77
+ K LS P
Sbjct: 179 AVWRKLLSTNP 189
Score = 27.7 bits (60), Expect = 3e-04
Identities = 17/89 (19%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 19 GTEYYNSGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYEKALSIRP- 77
G Y+++ + +++I + ++L +P +PD G + + A +++KA+SI P
Sbjct: 96 GHLYFDTHQAKEAIRAYERSLALKPNDPDVITDLGVMFRADHQHDKALAAFDKAVSINPK 155
Query: 78 NDLEIIKSYTMLLNSLELFKESVEILKNV 106
+++ + +L +E E + + + +
Sbjct: 156 HEIALFNKGIVLYFDMEKKDEGLAVWRKL 184
Score = 25.0 bits (53), Expect = 0.002
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 339 KKAISINKNDSKFWMHLSNVYKTIGKEDYSKEAYENAVNLE 379
++A+ N D+ W HL ++Y + + AYE ++ L+
Sbjct: 79 EQAVIKNPQDADAWTHLGHLYFDTHQAKEAIRAYERSLALK 119