Pairwise Alignments

Query, 388 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 574 a.a., Glycosyltransferase family 9 (heptosyltransferase) from Paraburkholderia bryophila 376MFSha3.1

 Score = 64.7 bits (156), Expect = 6e-15
 Identities = 50/222 (22%), Positives = 95/222 (42%), Gaps = 3/222 (1%)

Query: 60  GKSKLAQDSYEKALSIRPNDLEIIKSYTMLLNSLELFKESVEILKN---VSESDDKIIEI 116
           G   +AQ+ Y + L +RP   + ++    L       +E V++L     V+     +   
Sbjct: 25  GALAVAQELYREILELRPRHFDALQLLGALALQSGRIEEGVDLLARALAVNPKQAAVHSN 84

Query: 117 LGDAYLKTGKFNEAILQYNNILERKPRYKEILAKKGTALVGLKKFDEALEIYEKVLKISP 176
           L  A     +F++A+   N  L  +P++ + L  +G A  GL +  +AL  +++ + ++P
Sbjct: 85  LAYALNALHRFDQALASANRALALQPQFPDALNNRGNAQAGLDRPLDALASFDRAIALAP 144

Query: 177 YDTEVWKNIGNAFYTVKKYEKAIQFYDMYLNEHKGDFGVTLSKGDALRKLGKTNEALDLY 236
              + W N       + +   A+   D  L    G      ++G+AL  + + +EA   Y
Sbjct: 145 DFAQAWNNRACVLRDLGRPADALASCDRALALQPGYAEAWSNRGNALSDMNEPHEAERSY 204

Query: 237 TKVLEKHIQNYEPWCRVGLLYYDTEDYETAIYYLELANERNP 278
            + LE      + W  +GL   D   +E A+   + A   NP
Sbjct: 205 QRALELAPGFVDAWNNLGLTQIDQGRHEQALASYQRALALNP 246



 Score = 50.4 bits (119), Expect = 1e-10
 Identities = 37/180 (20%), Positives = 77/180 (42%), Gaps = 31/180 (17%)

Query: 27  KYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYEKALSIRPNDLEIIKSY 86
           ++ +++   N+ L  +P+ PDA   +GNA   L +   A  S+++A+++ P+  +   + 
Sbjct: 94  RFDQALASANRALALQPQFPDALNNRGNAQAGLDRPLDALASFDRAIALAPDFAQAWNNR 153

Query: 87  TMLLNSLELFKESVEILKNVSESDDKIIEILGDAYLKTGKFNEAILQYNNILERKPRYKE 146
             +L  L                               G+  +A+   +  L  +P Y E
Sbjct: 154 ACVLRDL-------------------------------GRPADALASCDRALALQPGYAE 182

Query: 147 ILAKKGTALVGLKKFDEALEIYEKVLKISPYDTEVWKNIGNAFYTVKKYEKAIQFYDMYL 206
             + +G AL  + +  EA   Y++ L+++P   + W N+G       ++E+A+  Y   L
Sbjct: 183 AWSNRGNALSDMNEPHEAERSYQRALELAPGFVDAWNNLGLTQIDQGRHEQALASYQRAL 242



 Score = 47.0 bits (110), Expect = 1e-09
 Identities = 49/223 (21%), Positives = 89/223 (39%), Gaps = 4/223 (1%)

Query: 94  ELFKESVEILKNVSESDDKIIEILGDAYLKTGKFNEAILQYNNILERKPRYKEILAKKGT 153
           EL++E +E+     ++    +++LG   L++G+  E +      L   P+   + +    
Sbjct: 32  ELYREILELRPRHFDA----LQLLGALALQSGRIEEGVDLLARALAVNPKQAAVHSNLAY 87

Query: 154 ALVGLKKFDEALEIYEKVLKISPYDTEVWKNIGNAFYTVKKYEKAIQFYDMYLNEHKGDF 213
           AL  L +FD+AL    + L + P   +   N GNA   + +   A+  +D  +       
Sbjct: 88  ALNALHRFDQALASANRALALQPQFPDALNNRGNAQAGLDRPLDALASFDRAIALAPDFA 147

Query: 214 GVTLSKGDALRKLGKTNEALDLYTKVLEKHIQNYEPWCRVGLLYYDTEDYETAIYYLELA 273
               ++   LR LG+  +AL    + L       E W   G    D  +   A    + A
Sbjct: 148 QAWNNRACVLRDLGRPADALASCDRALALQPGYAEAWSNRGNALSDMNEPHEAERSYQRA 207

Query: 274 NERNPLNPSILVKLGRTYVKLRNYNKGLEFMEKALDKDSEYAK 316
            E  P        LG T +    + + L   ++AL  + E A+
Sbjct: 208 LELAPGFVDAWNNLGLTQIDQGRHEQALASYQRALALNPEAAE 250



 Score = 45.8 bits (107), Expect = 3e-09
 Identities = 47/245 (19%), Positives = 96/245 (39%), Gaps = 34/245 (13%)

Query: 134 YNNILERKPRYKEILAKKGTALVGLKKFDEALEIYEKVLKISPYDTEVWKNIGNAFYTVK 193
           Y  ILE +PR+ + L   G   +   + +E +++  + L ++P    V  N+  A   + 
Sbjct: 34  YREILELRPRHFDALQLLGALALQSGRIEEGVDLLARALAVNPKQAAVHSNLAYALNALH 93

Query: 194 KYEKAIQFYDMYLNEHKGDFGVTLSKGDALRKLGKTNEALDLYTKVLEKHIQNYEPWCRV 253
           ++++A+   +  L           ++G+A   L +  +AL  + + +       + W   
Sbjct: 94  RFDQALASANRALALQPQFPDALNNRGNAQAGLDRPLDALASFDRAIALAPDFAQAW--- 150

Query: 254 GLLYYDTEDYETAIYYLELANERNPLNPSILVKLGRTYVKLRNYNKGLEFMEKALDKDSE 313
                               N R      +L  LGR    L +        ++AL     
Sbjct: 151 --------------------NNR----ACVLRDLGRPADALAS-------CDRALALQPG 179

Query: 314 YAKAWCYKGYILNLLERHYEAIDCYKKAISINKNDSKFWMHLSNVYKTIGKEDYSKEAYE 373
           YA+AW  +G  L+ +   +EA   Y++A+ +       W +L       G+ + +  +Y+
Sbjct: 180 YAEAWSNRGNALSDMNEPHEAERSYQRALELAPGFVDAWNNLGLTQIDQGRHEQALASYQ 239

Query: 374 NAVNL 378
            A+ L
Sbjct: 240 RALAL 244



 Score = 41.2 bits (95), Expect = 8e-08
 Identities = 33/163 (20%), Positives = 75/163 (46%)

Query: 217 LSKGDALRKLGKTNEALDLYTKVLEKHIQNYEPWCRVGLLYYDTEDYETAIYYLELANER 276
           L +  AL++ G    A +LY ++LE   ++++    +G L   +   E  +  L  A   
Sbjct: 15  LRQAVALQQNGALAVAQELYREILELRPRHFDALQLLGALALQSGRIEEGVDLLARALAV 74

Query: 277 NPLNPSILVKLGRTYVKLRNYNKGLEFMEKALDKDSEYAKAWCYKGYILNLLERHYEAID 336
           NP   ++   L      L  +++ L    +AL    ++  A   +G     L+R  +A+ 
Sbjct: 75  NPKQAAVHSNLAYALNALHRFDQALASANRALALQPQFPDALNNRGNAQAGLDRPLDALA 134

Query: 337 CYKKAISINKNDSKFWMHLSNVYKTIGKEDYSKEAYENAVNLE 379
            + +AI++  + ++ W + + V + +G+   +  + + A+ L+
Sbjct: 135 SFDRAIALAPDFAQAWNNRACVLRDLGRPADALASCDRALALQ 177



 Score = 25.8 bits (55), Expect = 0.003
 Identities = 14/47 (29%), Positives = 22/47 (46%)

Query: 35  FNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYEKALSIRPNDLE 81
           + + L   P   DAW   G      G+ + A  SY++AL++ P   E
Sbjct: 204 YQRALELAPGFVDAWNNLGLTQIDQGRHEQALASYQRALALNPEAAE 250