Pairwise Alignments

Query, 339 a.a., homoisocitrate dehydrogenase from Methanococcus maripaludis S2

Subject, 365 a.a., 3-isopropylmalate dehydrogenase from Synechococcus elongatus PCC 7942

 Score =  168 bits (426), Expect = 2e-46
 Identities = 123/342 (35%), Positives = 184/342 (53%), Gaps = 30/342 (8%)

Query: 1   MRNTPKICVINGDGIGNEVVPETVRVLNELG-----DFEFIHAHAGYECFKRCGDAIPEN 55
           M  + +I ++ GDGIG E++  TV +L  +G     +FEF  A  G       G+ +PE 
Sbjct: 1   MTRSYRITLLPGDGIGPEIMAVTVDILRAIGRQFDLNFEFEEALIGGSAIDATGEPLPEA 60

Query: 56  TIEIAKESDCILFGSVTTPKPTEL-KNKSYRSPILTLRKELDLYANIRPTYNFDNL---- 110
           T+   + SD +L  ++   K   L +++   + +L LR  L L+AN+RP      L    
Sbjct: 61  TLATCRNSDAVLLAAIGGYKWDSLPRSQRPETGLLGLRAGLGLFANLRPAAILPQLVDAS 120

Query: 111 ----------DFVIIRENTEGLYV---KKEYYDEKN-EVAIAERIISKFGSSRIVKFAFD 156
                     D +++RE T G+Y    K  + DE+  + A    +  +    RI + AFD
Sbjct: 121 SLKREVIEGVDLMVVRELTGGIYFGEPKGCFADEQGRQRAFNTMVYREDEIDRIGRVAFD 180

Query: 157 YAVQNNRKKVSCIHKANVLRVTDGLFLEVFEEMSKHYEKLGIKSDDYLIDATAMYLIRNP 216
            A +   K++  + KANVL V+  L+ +    +   Y    ++     +D  AM L+R P
Sbjct: 181 IA-RKRGKRLCSVDKANVLEVSQ-LWRDRMTLLGSDYAD--VELSHLYVDNAAMQLVRWP 236

Query: 217 QMFDVLVTTNLFGDILSDEAAGLIGGLGMSPSANIGDKN-GLFEPVHGSAPDIAGKGISN 275
           + FD +VT NLFGDILSD AA L G +GM PSA++G +  G+FEPVHGSAPDIAG+  +N
Sbjct: 237 KQFDTIVTGNLFGDILSDIAAMLTGSIGMLPSASLGAEGPGVFEPVHGSAPDIAGQDKAN 296

Query: 276 PIATILSAAMMLDH-LKMNKEAEYIRKAVKKTVECKYLTPDL 316
           P+A +LSAAMML + L   + A  I  AV + ++  Y T DL
Sbjct: 297 PLAQVLSAAMMLRYGLDEPEAAARIEAAVNQVLDQGYRTGDL 338