Pairwise Alignments

Query, 339 a.a., homoisocitrate dehydrogenase from Methanococcus maripaludis S2

Subject, 364 a.a., 3-isopropylmalate dehydrogenase (RefSeq) from Shewanella amazonensis SB2B

 Score =  176 bits (446), Expect = 8e-49
 Identities = 129/338 (38%), Positives = 182/338 (53%), Gaps = 31/338 (9%)

Query: 6   KICVINGDGIGNEVVPETVRVLNELG-----DFEFIHAHAGYECFKRCGDAIPENTIEIA 60
           +I V+ GDGIG EV+ E  +VL E+      + E+     G       G  +P+ T++  
Sbjct: 4   QIAVLAGDGIGPEVMAEARKVLAEVEARFDLNIEYSEYDVGGIAIDNHGCPLPDATLKGC 63

Query: 61  KESDCILFGSVTTPKPTEL--KNKSYRSPILTLRKELDLYANIRPT-------------- 104
           + +D ILFGSV  PK   L    +  R  +L LR   +L+ N+RP               
Sbjct: 64  EAADAILFGSVGGPKWEHLPPNEQPERGALLPLRGHFELFCNLRPARLHTGLEHMSPLRA 123

Query: 105 -YNFDNLDFVIIRENTEGLYVKK---EYYDEKNEVAIAERIISKFGSSRIVKFAFDYAVQ 160
             +    D + +RE T G+Y  K      + + E A      S+    RI K AF+ A +
Sbjct: 124 DISAQGFDVLCVRELTGGIYFGKPKGRQGEGEEEEAFDTMRYSRREIRRIAKIAFE-AAR 182

Query: 161 NNRKKVSCIHKANVLRVTDGLFLEVFEEMSKHYEKLGIKSDDYLIDATAMYLIRNPQMFD 220
             R KV+ + KANVL  +  L+ EV EE++K +  + +  +   ID   M L+R P  FD
Sbjct: 183 GRRGKVTSVDKANVLACSV-LWREVVEEVAKDFPDVTL--EHIYIDNATMQLLRRPFDFD 239

Query: 221 VLVTTNLFGDILSDEAAGLIGGLGMSPSANI-GDKNGLFEPVHGSAPDIAGKGISNPIAT 279
           V++ +NLFGDILSDE A L G +G+  SA++ G   GL+EP  GSAPDIAGKGI+NPIA 
Sbjct: 240 VMLCSNLFGDILSDEIAMLTGSMGLLSSASMNGSGFGLYEPAGGSAPDIAGKGIANPIAQ 299

Query: 280 ILSAAMMLDH-LKMNKEAEYIRKAVKKTVECKYLTPDL 316
           ILSAA+ML H LK  + A  I +AV   +E  +LT +L
Sbjct: 300 ILSAALMLRHSLKQEEAAACIERAVGAALEAGFLTGEL 337