Pairwise Alignments

Query, 339 a.a., homoisocitrate dehydrogenase from Methanococcus maripaludis S2

Subject, 364 a.a., 3-isopropylmalate dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  183 bits (465), Expect = 5e-51
 Identities = 131/338 (38%), Positives = 184/338 (54%), Gaps = 31/338 (9%)

Query: 6   KICVINGDGIGNEVVPETVRVLNELG-----DFEFIHAHAGYECFKRCGDAIPENTIEIA 60
           +I V+ GDGIG EV+ E  +VL  +      + E+     G       G  +PE T++  
Sbjct: 4   QIAVLAGDGIGPEVMAEARKVLKAVEARFGLNIEYTEYDVGGIAIDNHGCPLPEATLKGC 63

Query: 61  KESDCILFGSVTTPKPTEL--KNKSYRSPILTLRKELDLYANIRPTYNFDNL-------- 110
           + +D ILFGSV  PK  +L    +  R  +L LR   +L+ N+RP    D L        
Sbjct: 64  EAADAILFGSVGGPKWEKLPPNEQPERGALLPLRGHFELFCNLRPAKLHDGLEHMSPLRS 123

Query: 111 -------DFVIIRENTEGLYVKK---EYYDEKNEVAIAERIISKFGSSRIVKFAFDYAVQ 160
                  D + +RE T G+Y  K      + ++E A      S+   SRI + AF+ A +
Sbjct: 124 DISARGFDVLCVRELTGGIYFGKPKGRQGEGESEEAFDTMRYSRREISRIARIAFE-AAR 182

Query: 161 NNRKKVSCIHKANVLRVTDGLFLEVFEEMSKHYEKLGIKSDDYLIDATAMYLIRNPQMFD 220
             RKKV+ + KANVL  +  L+ +V EE++  +    ++ +   ID   M L+R P  FD
Sbjct: 183 GRRKKVTSVDKANVLACSV-LWRQVVEEVAVDFPD--VELEHIYIDNATMQLLRRPDEFD 239

Query: 221 VLVTTNLFGDILSDEAAGLIGGLGMSPSANIGDKN-GLFEPVHGSAPDIAGKGISNPIAT 279
           V++ +NLFGDILSDE A L G +G+  SA++     GLFEP  GSAPDIAGKGI+NPIA 
Sbjct: 240 VMLCSNLFGDILSDEIAMLTGSMGLLSSASMNSTGFGLFEPAGGSAPDIAGKGIANPIAQ 299

Query: 280 ILSAAMMLDH-LKMNKEAEYIRKAVKKTVECKYLTPDL 316
           ILSAA+ML H LK  + A  I +AV K +   YLT +L
Sbjct: 300 ILSAALMLRHSLKQEEAASAIERAVTKALNSGYLTGEL 337