Pairwise Alignments

Query, 339 a.a., homoisocitrate dehydrogenase from Methanococcus maripaludis S2

Subject, 335 a.a., isocitrate dehydrogenase, NAD-dependent (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  264 bits (675), Expect = 2e-75
 Identities = 144/337 (42%), Positives = 217/337 (64%), Gaps = 17/337 (5%)

Query: 7   ICVINGDGIGNEVVPETVRVLNELG-DFEFIHAHAGYECFKRCGDAIPENTIEIAKESDC 65
           I VI GDGIG  ++   +++L++ G DFE+  A AG    ++ G+ +P+ T+E+ +++  
Sbjct: 6   ITVIPGDGIGPSIIDSALKILDKAGCDFEYEFADAGLAALEKQGELLPQRTLELIEKNRI 65

Query: 66  ILFGSVTTPKPTELKNKSYRSPILTLRKELDLYANIRPTYNF-------DNLDFVIIREN 118
            L G +TTP       + + S  +TLRK+  LYAN+RP  +F       +N+D + +REN
Sbjct: 66  TLKGPLTTPV-----GEGFTSINVTLRKKFGLYANVRPVLSFKGTQARYENIDIITVREN 120

Query: 119 TEGLYVKK-EYYDEKNEVAIAERIISKFGSSRIVKFAFDYAVQNNRKKVSCIHKANVLRV 177
           TEG+Y    +   E    A A  I+++ G+ +I  FA++ A + +RKKV+ +HKAN+++ 
Sbjct: 121 TEGMYSGHGQKVSEDGSTAEATSIVTRQGAEQIATFAYELARKESRKKVTIVHKANIMKS 180

Query: 178 TDGLFLEVFEEMSKHYEKLGIKSDDYLIDATAMYLIRNPQMFDVLVTTNLFGDILSDEAA 237
           T GLFL+V  E+S  Y    IK+++ ++DAT M L+ NP+ FDV+VTTNLFGDILSD  A
Sbjct: 181 TSGLFLKVAREVSLRYPD--IKTEEMIVDATCMKLVMNPENFDVIVTTNLFGDILSDLCA 238

Query: 238 GLIGGLGMSPSANIGDKNGLFEPVHGSAPDIAGKGISNPIATILSAAMMLDHLKMNKEAE 297
           GL+GGLGM+P ANIG    +FE VHGSAPDIAGK ++NP + IL++  ML++L M  +A 
Sbjct: 239 GLVGGLGMAPGANIGRDAAIFEAVHGSAPDIAGKNLANPTSVILASIQMLEYLGMADKAA 298

Query: 298 YIRKAVKKTV-ECKYLTPDLGGNLKTFEVTEKIIESI 333
            IRKAV   + E    T DLGG   T + T+ +++ +
Sbjct: 299 PIRKAVSAVIEEGDRTTRDLGGTHGTTDFTQAVLDRL 335