Pairwise Alignments

Query, 339 a.a., homoisocitrate dehydrogenase from Methanococcus maripaludis S2

Subject, 357 a.a., 3-isopropylmalate dehydrogenase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  180 bits (456), Expect = 6e-50
 Identities = 130/343 (37%), Positives = 184/343 (53%), Gaps = 32/343 (9%)

Query: 7   ICVINGDGIGNEVVPETVRVLNELGDFEFIH------AHAGYECFKRCGDAIPENTIEIA 60
           IC++ GDGIG E+V +  +VL+ +    F H      A  G       G  +P+ T+E  
Sbjct: 5   ICLLPGDGIGPEIVAQGTKVLDAVAR-RFGHTVSTSSALIGGAAIDATGSPLPDATVEAC 63

Query: 61  KESDCILFGSVTTPKPTELKN-KSYRSPILTLRKELDLYANIRPTYNFDNL--------- 110
           + SD +L G+V  PK  +L + K     +L +RK L L+AN+RP   F  L         
Sbjct: 64  RTSDAVLLGAVGGPKWDDLPSEKRPEKGLLGIRKALGLFANLRPAALFPELAGACLLRAD 123

Query: 111 ------DFVIIRENTEGLYVKKEYYDEKNE---VAIAERIISKFGSSRIVKFAFDYAVQN 161
                 D V++RE T  +Y  +    E  +         I  +    RI + AFD A + 
Sbjct: 124 IAAAGLDLVVVRELTGDVYFGQPAGIETRDGLRTGFNTMIYDEDEVRRIARVAFDTA-RA 182

Query: 162 NRKKVSCIHKANVLRVTDGLFLEVFEEMSKHYEKLGIKSDDYLIDATAMYLIRNPQMFDV 221
            +++V  + KANVL  T  L+ EV EE+++ Y    ++     +D  AM L+R P  FDV
Sbjct: 183 RKRRVCSVDKANVL-ATSRLWREVVEEVARDYPD--VELSHMYVDNAAMQLVRWPAQFDV 239

Query: 222 LVTTNLFGDILSDEAAGLIGGLGMSPSANIGDKN-GLFEPVHGSAPDIAGKGISNPIATI 280
           +VT NLFGDILSDEAA + G +GM PSA++G     LFEP+HGSAPDIAG+  +NPIATI
Sbjct: 240 IVTGNLFGDILSDEAAVITGSIGMLPSASMGSGGPALFEPIHGSAPDIAGQDKANPIATI 299

Query: 281 LSAAMMLD-HLKMNKEAEYIRKAVKKTVECKYLTPDLGGNLKT 322
           LS  MML     +  EA+ I  AV++ +   Y T D+  N +T
Sbjct: 300 LSVGMMLRLGFGLAAEADAIDAAVRRVLAEGYRTGDIMENGRT 342