Pairwise Alignments

Query, 339 a.a., homoisocitrate dehydrogenase from Methanococcus maripaludis S2

Subject, 396 a.a., isocitrate dehydrogenase [NADP] (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  160 bits (404), Expect = 7e-44
 Identities = 118/386 (30%), Positives = 190/386 (49%), Gaps = 62/386 (16%)

Query: 3   NTPKICVINGDGIGNEVVPETVRVLNELGD--------FEFIHAHAGYECFKRCGDAIPE 54
           + P +  I GDG+G EV P    V+N             E+    AG   F   G  +P+
Sbjct: 16  DVPVVPYITGDGVGAEVTPSMQSVVNAAVQKAYGGKRRIEWKEVLAGERAFNETGSWLPD 75

Query: 55  NTIEIAKESDCILFGSVTTPKPTELKNKSYRSPILTLRKELDLYANIRPTYNF------- 107
            T++  +E    + G +TTP          RS  + LR+ LDLY  +RP   +       
Sbjct: 76  ETMKAFQEYLIGIKGPLTTPV-----GGGIRSLNVALRQTLDLYVCLRPVRWYQGVHSPV 130

Query: 108 ---DNLDFVIIRENTEGLYV-----------KKEYYDEKNEVAIAE-----------RII 142
              + ++  + RENTE +Y            +K Y   KNE+ + +           + +
Sbjct: 131 KAPEKVNMCVFRENTEDIYAGIEWEAGTPEAEKFYQFLKNEMGVTKVRFPETSSFGVKPV 190

Query: 143 SKFGSSRIVKFAFDYAVQNNRKKVSCIHKANVLRVTDGLFLEVFEEMSKHY-------EK 195
           S+ G+ R+V+ A  YA+ ++   V+ +HK N+++ T+G F +   E+++          +
Sbjct: 191 SREGTERLVRAACQYALDHHLPSVTLVHKGNIMKFTEGGFKKWGYELAQREFGDALADGR 250

Query: 196 LGIKSDDYLIDATAMYLIRNPQMFDVLVTTNLFGDILSDEAAGLIGGLGMSPSANIGDKN 255
           L IK  D + DA     +  P+ + V+ T NL GD +SD+ A ++GG+G++P ANI  K 
Sbjct: 251 LVIK--DCIADAFLQNTLLIPEEYSVIATLNLNGDYVSDQLAAMVGGIGIAPGANINYKT 308

Query: 256 G--LFEPVHGSAPDIAGKGISNPIATILSAAMMLDHLKMNKEAEYIRKAVKKTVECKYLT 313
           G  +FE  HG+AP+IAGK + NP + ILSA MML++L   + A  I KA++++      T
Sbjct: 309 GHAIFEATHGTAPNIAGKDVVNPCSIILSAVMMLEYLGWKEAAALIEKALEQSFLDARAT 368

Query: 314 PDL------GGNLKTFEVTEKIIESI 333
            DL      G +L T   T +I+E I
Sbjct: 369 HDLARFMPGGTSLSTTAFTREIVERI 394