Pairwise Alignments

Query, 352 a.a., 7 8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG from Methanococcus maripaludis S2

Subject, 336 a.a., FO synthase subunit 1 from Synechococcus elongatus PCC 7942

 Score =  154 bits (388), Expect = 4e-42
 Identities = 108/295 (36%), Positives = 162/295 (54%), Gaps = 29/295 (9%)

Query: 49  CRNVCGYCTFRNENFKLLKMDE-------MKEILTKADTFGCREALFTFGENVDENEKVK 101
           C N C YC FR +      MDE        + +LT  D   C E L   GE   ++ +  
Sbjct: 32  CFNRCTYCNFRRDP----GMDEWLSLSTAQQRLLTVRDRGVC-EVLILSGEVHPQSPR-- 84

Query: 102 EELKKMGYSGILEYLYEISAWCLENTNLIPHTNCGILSYDELKYLREVNASMGLMLENSS 161
                   +   + L E++   L+    +PHTN G L+  E+  L+ VN S+GLMLE  +
Sbjct: 85  -------RAAWRQRLIELAELALD-MGFLPHTNAGPLNRAEMIALQNVNVSLGLMLEQLT 136

Query: 162 ARLCGTIAHEKSPGKDPKLRIEMIENAGKLKIPFTTGILIGIGETFEERVNSIFEIKRIH 221
            +L  T+ H  +P KDP+LR++ +E AG+L IPFTTG+L+GIGET  +R+ ++  I   H
Sbjct: 137 PQLQRTV-HRAAPSKDPQLRLQQLEQAGELGIPFTTGLLLGIGETSRDRLETLEAIAACH 195

Query: 222 EKYGHIQEVIVQNFRSKPQIPMENYKEPSPVEMFKMIILSKLIL-EDISIQVPPNLNRET 280
           +++GHIQEVI+Q      Q  ++ +   +P E+   + +++ +L   I+IQVPPNL  + 
Sbjct: 196 DRWGHIQEVILQPHSPGRQQAIQ-HPPLAPDELIDCVAIARQVLPTSIAIQVPPNLLTQP 254

Query: 281 GQL--FLMAGIDDWGGVSPLTKDFVNPEAPWPDIEELNIFSKELGFTLKERLPVY 333
            QL   L AG  D GG+ P   D VNP+    D++EL     + G+ L+ RLPVY
Sbjct: 255 QQLADCLGAGARDLGGIVPY--DEVNPDYQHHDLDELREALAQQGWQLQPRLPVY 307