Pairwise Alignments

Query, 567 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 237 a.a., type IV pilus biogenesis/stability protein PilW from Vibrio cholerae E7946 ATCC 55056

 Score = 42.0 bits (97), Expect = 3e-08
 Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 10/141 (7%)

Query: 420 ESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGE---AEIEFKKAVALDGSNS 476
           E+G    A+   +KA+   P   + +     +  Y E  GE   A   ++ A++    N 
Sbjct: 47  ENGSMIKARENLEKALQHAP---DYYRSQLSMAHYYEAVGENDSARKMYRTALSEHPKNG 103

Query: 477 KAYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYW--AAIYNLAAMYAALKRYDEAVAQVK 534
              NN  TFL K  +YD A++++++A+E  P Y+  +A Y  A +  ALK      A+  
Sbjct: 104 NVLNNFGTFLCKQGEYDTADQYFRRAVE-QPYYYLISASYENAGL-CALKAGKTDNAREY 161

Query: 535 SMVKIFRSDGNIKEVLELKKL 555
               I      +  +L+L K+
Sbjct: 162 FKRAIDHDPNRLLSILQLTKM 182