Pairwise Alignments

Query, 567 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 175 a.a., TPR repeat from Synechococcus elongatus PCC 7942

 Score = 47.8 bits (112), Expect = 3e-10
 Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 11/112 (9%)

Query: 437 LNPGNSEVHNHYGCLLEYLEK--YGEAEIEFKKAVALDGSN-------SKAYNNLATFLA 487
           L+ G     +HY     +LEK  YG A  +F+  +AL   N       +  YN L    A
Sbjct: 44  LSQGRGAAEDHYRLGSIFLEKKLYGPAIAQFQ--LALKDKNLTDPVGLALLYNALGYAYA 101

Query: 488 KSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAVAQVKSMVKI 539
             E++D A   YK+A+E  PDY  A+ NL   Y   +   +A+A  +S++ +
Sbjct: 102 AQEQFDLAIRQYKEALEQQPDYVTALNNLGFAYEKKQLLSQAIATYESVLAL 153



 Score = 33.5 bits (75), Expect = 7e-06
 Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 9/96 (9%)

Query: 90  KLDDPELKKQISIHQSEFEDNYGLS-----KKVNDEVE---KLKKMEKKGTDFVESQISF 141
           ++D   L++Q+S  +   ED+Y L      KK+        +L   +K  TD V   + +
Sbjct: 34  EVDFSRLQQQLSQGRGAAEDHYRLGSIFLEKKLYGPAIAQFQLALKDKNLTDPVGLALLY 93

Query: 142 N-MGNIYFNFGKYAEAIRCYKKAVKIIPDFVDALHN 176
           N +G  Y    ++  AIR YK+A++  PD+V AL+N
Sbjct: 94  NALGYAYAAQEQFDLAIRQYKEALEQQPDYVTALNN 129