Pairwise Alignments

Query, 567 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 502 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 47.8 bits (112), Expect = 1e-09
 Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 5/106 (4%)

Query: 432 KKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSKAYNNLATFLAKSEK 491
           +KA+A++P ++        LL Y   + EA+ EF KA+ LD + +  +  L+     + +
Sbjct: 328 RKAVAIDPNDAGCRWVLANLLAYERSFAEADAEFAKAIELDPNEADTWATLSDIAVLAGR 387

Query: 492 YDEAEEHYKKAIEIAPDYWAAIYNLA---AMYAALKRYDEAVAQVK 534
            +E  EH +KA  + P + A+ Y L    A YAA   Y+ AV  ++
Sbjct: 388 VEEGVEHIRKAFRLNP-FPASWYYLTLGQAQYAA-GEYEAAVETLR 431



 Score = 39.7 bits (91), Expect = 3e-07
 Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 21/122 (17%)

Query: 433 KAIALNPGNSEVHN-----------HYGCLLEYLEKYGEAEIEF-KKAVALDGSNSKAYN 480
           +A++L+P  +E +            H+G   E +E      +E  +KAVA+D +++    
Sbjct: 286 RAVSLDPEYAEAYRWLAMNHWMRWVHWG---EPVEPNRSVALELARKAVAIDPNDAGCRW 342

Query: 481 NLATFLAKSEKYDEAEEHYKKAIEIAP---DYWAAIYNLAAMYAALKRYDEAVAQVKSMV 537
            LA  LA    + EA+  + KAIE+ P   D WA + ++A +     R +E V  ++   
Sbjct: 343 VLANLLAYERSFAEADAEFAKAIELDPNEADTWATLSDIAVLAG---RVEEGVEHIRKAF 399

Query: 538 KI 539
           ++
Sbjct: 400 RL 401



 Score = 26.6 bits (57), Expect = 0.003
 Identities = 32/121 (26%), Positives = 49/121 (40%), Gaps = 4/121 (3%)

Query: 415 ANTLYESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDG- 473
           AN L     F  A  E+ KAI L+P  ++       +     +  E     +KA  L+  
Sbjct: 345 ANLLAYERSFAEADAEFAKAIELDPNEADTWATLSDIAVLAGRVEEGVEHIRKAFRLNPF 404

Query: 474 SNSKAYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAVAQV 533
             S  Y  L      + +Y+ A E  ++         ++   LAA  A L R DEA A+V
Sbjct: 405 PASWYYLTLGQAQYAAGEYEAAVETLRRDETYRT---SSRRFLAASLAQLGRLDEARAEV 461

Query: 534 K 534
           +
Sbjct: 462 E 462