Pairwise Alignments

Query, 567 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 262 a.a., type IV pilus biogenesis/stability protein PilW (RefSeq) from Shewanella loihica PV-4

 Score = 48.5 bits (114), Expect = 3e-10
 Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 7/96 (7%)

Query: 417 TLYESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIE---FKKAVALDG 473
           T  + G+ E AK    KA+   P   +VH     L  Y +  GE E+    ++ A+    
Sbjct: 55  TYLQKGNSEQAKYNLDKALEFAPNIEDVHV---ALAYYYQSVGELELTEKAYRNAINASD 111

Query: 474 SNSKAYNNLATFLAKSEKYDEAEEHYKKAIEIAPDY 509
           ++  + NN   FL +  KYD+AEE + +A+++ P Y
Sbjct: 112 ASGDSMNNFGVFLCQQAKYDQAEEMFLRAVKM-PKY 146