Pairwise Alignments
Query, 567 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2
Subject, 344 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis JJ
Score = 68.2 bits (165), Expect = 5e-16
Identities = 39/113 (34%), Positives = 62/113 (54%)
Query: 418 LYESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSK 477
LY G++ + +EY A+ NP ++E+ + G L L YGE+ F KA+ +D NS+
Sbjct: 35 LYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESTECFNKALLIDSENSE 94
Query: 478 AYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAV 530
A+N L T L+K+ Y +A E Y K++ I + A N ++RY EA+
Sbjct: 95 AFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEAWNNKGITLTNMQRYSEAI 147
Score = 57.8 bits (138), Expect = 7e-13
Identities = 33/128 (25%), Positives = 61/128 (47%)
Query: 403 IDNNEFLEILSFANTLYESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAE 462
ID+ L ++G+++ A Y K++ ++ NSE N+ G L +++Y EA
Sbjct: 88 IDSENSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEAWNNKGITLTNMQRYSEAI 147
Query: 463 IEFKKAVALDGSNSKAYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAA 522
F ++++++ NS + N K KY E+ + Y KA+ I A+ Y
Sbjct: 148 ECFDRSISINAKNSDVWYNKGESQFKLGKYQESIDSYNKALLIDEKMETALLGKGNSYLK 207
Query: 523 LKRYDEAV 530
L+ Y+ A+
Sbjct: 208 LQNYESAI 215
Score = 57.0 bits (136), Expect = 1e-12
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 1/148 (0%)
Query: 384 ELLDKSELESELVEEHTYEIDNNEFLEI-LSFANTLYESGDFEAAKTEYKKAIALNPGNS 442
EL ++ + E + ++N + EI ++ N+L + G + + + KA+ ++ NS
Sbjct: 34 ELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESTECFNKALLIDSENS 93
Query: 443 EVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSKAYNNLATFLAKSEKYDEAEEHYKKA 502
E N G +L Y +A + K++ +D NS+A+NN L ++Y EA E + ++
Sbjct: 94 EAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEAWNNKGITLTNMQRYSEAIECFDRS 153
Query: 503 IEIAPDYWAAIYNLAAMYAALKRYDEAV 530
I I YN L +Y E++
Sbjct: 154 ISINAKNSDVWYNKGESQFKLGKYQESI 181
Score = 47.0 bits (110), Expect = 1e-09
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
Query: 370 NQEVIIEEKLETL-----DELLDKSELESELVEEHTYEIDN--NEFLEILSFANTLYESG 422
N+ ++I+EK+ET + L ES + +T E N +E+ A+ ++
Sbjct: 185 NKALLIDEKMETALLGKGNSYLKLQNYESAIECFNTAETINPKSEYPPYYK-ADAYRDTE 243
Query: 423 DFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSKAYNNL 482
+FE A Y + + +NP N++V + G + ++ Y A F A+ LD N + +
Sbjct: 244 NFEDALKYYDETLEINPSNADVLINKGICFDKMKNYSSAISNFDLAIQLDPKNVQIWILK 303
Query: 483 ATFLAKSEKYDEAEEHYKKAIEIAPD 508
+ Y+ + YKKA+E+ P+
Sbjct: 304 GNSYVGLKDYEFSISCYKKALELDPE 329
Score = 34.3 bits (77), Expect = 8e-06
Identities = 68/314 (21%), Positives = 116/314 (36%), Gaps = 51/314 (16%)
Query: 137 SQISFNMGNIYFNFGKYAEAIRCYKKAVKIIPDFVDALHNFNSLSNMNLFDMGEEPKKPV 196
++I N GN G Y E+ C+ KA+ I + +A FN L + L G K
Sbjct: 59 AEIWVNKGNSLLKLGIYGESTECFNKALLIDSENSEA---FNGLGTV-LSKTGNYQKALE 114
Query: 197 LY-KDVTIDELVPDIFSNTVQKEPEEPQKYSELEPEELEDLILDGEIGENLEEIGSEDEL 255
+Y K + ID + ++N G L + E
Sbjct: 115 MYDKSLNIDSENSEAWNNK----------------------------GITLTNMQRYSEA 146
Query: 256 TEKIDDKLPEIDESKDKSKAQPEDELNETFEEGIEYETFEVIDAEEKNEISDENLEISSL 315
E D + ++ D + E + F+ G +Y+ E ID+ K + DE +E + L
Sbjct: 147 IECFDRSISINAKNSDVWYNKGESQ----FKLG-KYQ--ESIDSYNKALLIDEKMETALL 199
Query: 316 EPEFEEKSIFKLEKETEQPELEENLEPVLEVPEELVEDV--------EILDASEEDIEKE 367
+ E E E + P E P D + L +E +E
Sbjct: 200 GKGNSYLKLQNYESAIECFNTAETINPKSEYPPYYKADAYRDTENFEDALKYYDETLEIN 259
Query: 368 LENQEVIIEEKLETLDELLDKSELESELVEEHTYEIDNNEFLEILSFANTLYESGDFEAA 427
N +V+I + + D++ + S S + ++D + N+ D+E +
Sbjct: 260 PSNADVLINKGI-CFDKMKNYSSAISNF--DLAIQLDPKNVQIWILKGNSYVGLKDYEFS 316
Query: 428 KTEYKKAIALNPGN 441
+ YKKA+ L+P N
Sbjct: 317 ISCYKKALELDPEN 330
Score = 31.2 bits (69), Expect = 7e-05
Identities = 28/143 (19%), Positives = 55/143 (38%), Gaps = 34/143 (23%)
Query: 431 YKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSKA------------ 478
+ ++I++N NS+V + G L KY E+ + KA+ +D A
Sbjct: 150 FDRSISINAKNSDVWYNKGESQFKLGKYQESIDSYNKALLIDEKMETALLGKGNSYLKLQ 209
Query: 479 --------YNNLATFLAKSE--------------KYDEAEEHYKKAIEIAPDYWAAIYNL 516
+N T KSE +++A ++Y + +EI P + N
Sbjct: 210 NYESAIECFNTAETINPKSEYPPYYKADAYRDTENFEDALKYYDETLEINPSNADVLINK 269
Query: 517 AAMYAALKRYDEAVAQVKSMVKI 539
+ +K Y A++ +++
Sbjct: 270 GICFDKMKNYSSAISNFDLAIQL 292
Score = 30.4 bits (67), Expect = 1e-04
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 138 QISFNMGNIYFNFGKYAEAIRCYKKAVKIIPDFVDALHNFN 178
QI GN Y Y +I CYKKA+++ P+ +A N +
Sbjct: 298 QIWILKGNSYVGLKDYEFSISCYKKALELDPENENAKENID 338
Score = 30.0 bits (66), Expect = 2e-04
Identities = 47/201 (23%), Positives = 82/201 (40%), Gaps = 47/201 (23%)
Query: 137 SQISFNMGNIYFNFGKYAEAIRCYKKAVKI-----------------IPDFVDALHNFNS 179
S + +N G F GKY E+I Y KA+ I + ++ A+ FN+
Sbjct: 161 SDVWYNKGESQFKLGKYQESIDSYNKALLIDEKMETALLGKGNSYLKLQNYESAIECFNT 220
Query: 180 LSNMNLFDMGEEPKKPVLYKDVTIDELVPDIFSNTVQKEPEEPQKY----SELEPEELED 235
+N + + P YK D + +T + E+ KY E+ P +
Sbjct: 221 AETIN-----PKSEYPPYYK--------ADAYRDT--ENFEDALKYYDETLEINPSNADV 265
Query: 236 LILDG---EIGENLEEIGSEDELTEKIDDKLPEIDESKDKSKAQPEDELNETFEEGIE-Y 291
LI G + +N S +L ++D K +I K S +D +E I Y
Sbjct: 266 LINKGICFDKMKNYSSAISNFDLAIQLDPKNVQIWILKGNSYVGLKD-----YEFSISCY 320
Query: 292 ETFEVIDAEEKNEISDENLEI 312
+ + ++ + +NE + EN++I
Sbjct: 321 K--KALELDPENENAKENIDI 339
Score = 26.2 bits (56), Expect = 0.002
Identities = 21/98 (21%), Positives = 41/98 (41%)
Query: 442 SEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSKAYNNLATFLAKSEKYDEAEEHYKK 501
S+ +N G L Y ++ E+ A+ + +++ + N L K Y E+ E + K
Sbjct: 25 SKSYNDKGLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESTECFNK 84
Query: 502 AIEIAPDYWAAIYNLAAMYAALKRYDEAVAQVKSMVKI 539
A+ I + A L + + Y +A+ + I
Sbjct: 85 ALLIDSENSEAFNGLGTVLSKTGNYQKALEMYDKSLNI 122
Score = 26.2 bits (56), Expect = 0.002
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Query: 100 ISIHQSEFEDNYGLSKKVNDEVEKLKKMEKKGT--DFVESQISFNMGNIYFNFGKYAEAI 157
I SE + G +K +M K D S+ N G N +Y+EAI
Sbjct: 88 IDSENSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEAWNNKGITLTNMQRYSEAI 147
Query: 158 RCYKKAVKIIPDFVDALHN 176
C+ +++ I D +N
Sbjct: 148 ECFDRSISINAKNSDVWYN 166