Pairwise Alignments
Query, 567 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2
Subject, 714 a.a., hypothetical protein from Burkholderia phytofirmans PsJN
Score = 70.5 bits (171), Expect = 2e-16
Identities = 41/127 (32%), Positives = 65/127 (51%)
Query: 413 SFANTLYESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALD 472
+ N L E G A Y++A+ + P E N+ G +L+ ++ EAE+ F+ A+A+
Sbjct: 189 NLGNVLMELGRLAEADAAYREALTIRPQYPEALNNLGGVLKATFRHTEAELAFRLALAIR 248
Query: 473 GSNSKAYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAVAQ 532
++A NL T LA E+ EAE Y+ AI PDY A YNL ++ EA A
Sbjct: 249 PDYAEALLNLGTVLADFERLPEAEAAYRDAIAQRPDYAEAHYNLGVTLCKMEHLFEAEAA 308
Query: 533 VKSMVKI 539
+ +++
Sbjct: 309 YREAIRL 315
Score = 65.5 bits (158), Expect = 7e-15
Identities = 37/112 (33%), Positives = 62/112 (55%)
Query: 418 LYESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSK 477
LY G E A+ Y++A+A+ P +E H + G +L L + EAE F+ A+ ++++
Sbjct: 126 LYGLGYKEEAEASYRQALAIRPDYAEAHYNRGIVLHELRRPQEAEAAFRDALPGLPAHAE 185
Query: 478 AYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEA 529
+NNL L + + EA+ Y++A+ I P Y A+ NL + A R+ EA
Sbjct: 186 VHNNLGNVLMELGRLAEADAAYREALTIRPQYPEALNNLGGVLKATFRHTEA 237
Score = 63.2 bits (152), Expect = 3e-14
Identities = 36/120 (30%), Positives = 65/120 (54%)
Query: 418 LYESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSK 477
L+E + A+ ++ A+ P ++EVHN+ G +L L + EA+ +++A+ + +
Sbjct: 160 LHELRRPQEAEAAFRDALPGLPAHAEVHNNLGNVLMELGRLAEADAAYREALTIRPQYPE 219
Query: 478 AYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAVAQVKSMV 537
A NNL L + ++ EAE ++ A+ I PDY A+ NL + A +R EA A + +
Sbjct: 220 ALNNLGGVLKATFRHTEAELAFRLALAIRPDYAEALLNLGTVLADFERLPEAEAAYRDAI 279
Score = 62.0 bits (149), Expect = 8e-14
Identities = 38/137 (27%), Positives = 67/137 (48%)
Query: 411 ILSFANTLYESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVA 470
+L+ L + A+ Y+ AIA P +E H + G L +E EAE +++A+
Sbjct: 255 LLNLGTVLADFERLPEAEAAYRDAIAQRPDYAEAHYNLGVTLCKMEHLFEAEAAYREAIR 314
Query: 471 LDGSNSKAYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAV 530
L A+NNL L + ++ A + +++A+ + PD A YNL A A L ++ EA
Sbjct: 315 LRPDLVHAHNNLGCVLRRLDRLPAAVDAFEQALGVCPDMAEAHYNLGAARAQLMQFPEAE 374
Query: 531 AQVKSMVKIFRSDGNIK 547
+ + + + G+ K
Sbjct: 375 SAYRRALALRADYGDAK 391
Score = 60.1 bits (144), Expect = 3e-13
Identities = 30/102 (29%), Positives = 57/102 (55%)
Query: 427 AKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSKAYNNLATFL 486
A+ Y++AI L P HN+ GC+L L++ A F++A+ + ++A+ NL
Sbjct: 305 AEAAYREAIRLRPDLVHAHNNLGCVLRRLDRLPAAVDAFEQALGVCPDMAEAHYNLGAAR 364
Query: 487 AKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDE 528
A+ ++ EAE Y++A+ + DY A + L+ + + R++E
Sbjct: 365 AQLMQFPEAESAYRRALALRADYGDAKFGLSVLLLGMGRFEE 406
Score = 56.2 bits (134), Expect = 4e-12
Identities = 37/127 (29%), Positives = 60/127 (47%)
Query: 413 SFANTLYESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALD 472
S L G AAK Y++ +AL PG+ + NH G +L L EAE +++A+A+
Sbjct: 87 SLGMLLKSLGRLSAAKAMYRQLVALRPGDPDARNHLGAVLYGLGYKEEAEASYRQALAIR 146
Query: 473 GSNSKAYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAVAQ 532
++A+ N L + + EAE ++ A+ P + NL + L R EA A
Sbjct: 147 PDYAEAHYNRGIVLHELRRPQEAEAAFRDALPGLPAHAEVHNNLGNVLMELGRLAEADAA 206
Query: 533 VKSMVKI 539
+ + I
Sbjct: 207 YREALTI 213
Score = 55.1 bits (131), Expect = 9e-12
Identities = 33/105 (31%), Positives = 55/105 (52%)
Query: 427 AKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSKAYNNLATFL 486
A+ +++ + L P ++V+ G LL+ L + A+ +++ VAL + A N+L L
Sbjct: 67 AERYWRRCLQLRPDYADVYGSLGMLLKSLGRLSAAKAMYRQLVALRPGDPDARNHLGAVL 126
Query: 487 AKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAVA 531
+EAE Y++A+ I PDY A YN + L+R EA A
Sbjct: 127 YGLGYKEEAEASYRQALAIRPDYAEAHYNRGIVLHELRRPQEAEA 171
Score = 54.7 bits (130), Expect = 1e-11
Identities = 34/104 (32%), Positives = 53/104 (50%)
Query: 427 AKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSKAYNNLATFL 486
A+ ++ A+A+ P +E + G +L E+ EAE ++ A+A ++A+ NL L
Sbjct: 237 AELAFRLALAIRPDYAEALLNLGTVLADFERLPEAEAAYRDAIAQRPDYAEAHYNLGVTL 296
Query: 487 AKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAV 530
K E EAE Y++AI + PD A NL + L R AV
Sbjct: 297 CKMEHLFEAEAAYREAIRLRPDLVHAHNNLGCVLRRLDRLPAAV 340
Score = 35.8 bits (81), Expect = 6e-06
Identities = 14/44 (31%), Positives = 27/44 (61%)
Query: 137 SQISFNMGNIYFNFGKYAEAIRCYKKAVKIIPDFVDALHNFNSL 180
+++ N+GN+ G+ AEA Y++A+ I P + +AL+N +
Sbjct: 184 AEVHNNLGNVLMELGRLAEADAAYREALTIRPQYPEALNNLGGV 227
Score = 33.9 bits (76), Expect = 2e-05
Identities = 19/75 (25%), Positives = 37/75 (49%)
Query: 426 AAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSKAYNNLATF 485
AA +++A+ + P +E H + G L ++ EAE +++A+AL A L+
Sbjct: 338 AAVDAFEQALGVCPDMAEAHYNLGAARAQLMQFPEAESAYRRALALRADYGDAKFGLSVL 397
Query: 486 LAKSEKYDEAEEHYK 500
L +++E Y+
Sbjct: 398 LLGMGRFEEGWRLYE 412
Score = 31.2 bits (69), Expect = 1e-04
Identities = 18/79 (22%), Positives = 37/79 (46%)
Query: 472 DGSNSKAYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAVA 531
DG+ + A N ++ EAE ++++ +++ PDY +L + +L R A A
Sbjct: 44 DGALADALNIAGACSFALQRPAEAERYWRRCLQLRPDYADVYGSLGMLLKSLGRLSAAKA 103
Query: 532 QVKSMVKIFRSDGNIKEVL 550
+ +V + D + + L
Sbjct: 104 MYRQLVALRPGDPDARNHL 122
Score = 28.1 bits (61), Expect = 0.001
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 142 NMGNIYFNFGKYAEAIRCYKKAVKIIPDFVDALHNFNSLSNMNLFDMGEEPKKPVLYKD 200
N+G + ++ EA ++ A+ I PD+ +AL N ++ L D P+ Y+D
Sbjct: 223 NLGGVLKATFRHTEAELAFRLALAIRPDYAEALLNLGTV----LADFERLPEAEAAYRD 277
Score = 28.1 bits (61), Expect = 0.001
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 133 DFVESQISFNMGNIYFNFGKYAEAIRCYKKAVKIIPDFVDALHN 176
D+ E+ + N+G + +F + EA Y+ A+ PD+ +A +N
Sbjct: 250 DYAEALL--NLGTVLADFERLPEAEAAYRDAIAQRPDYAEAHYN 291